Results 101 to 110 of about 14,864,540 (284)

Wheat chromatin architecture is organized in genome territories and transcription factories

Genome Biology, 2020
Background Polyploidy is ubiquitous in eukaryotic plant and fungal lineages, and it leads to the co-existence of several copies of similar or related genomes in one nucleus.
Lorenzo Concia, Alaguraj Veluchamy, Juan S. Ramirez-Prado, Azahara Martin-Ramirez, Ying Huang, Magali Perez, Severine Domenichini, Natalia Y. Rodriguez Granados, Soonkap Kim, Thomas Blein, Susan Duncan, Clement Pichot, Deborah Manza-Mianza, Caroline Juery, Etienne Paux, Graham Moore, Heribert Hirt, Catherine Bergounioux, Martin Crespi, Magdy M. Mahfouz, Abdelhafid Bendahmane, Chang Liu, Anthony Hall, Cécile Raynaud, David Latrasse, Moussa Benhamed   +25 more
doaj   +1 more source

A Genome-wide hybrid incompatibility landscape between Caenorhabditis briggsae and C. nigoni. [PDF]

PLoS Genetics, 2015
Systematic characterization of ẖybrid incompatibility (HI) between related species remains the key to understanding speciation. The genetic basis of HI has been intensively studied in Drosophila species, but remains largely unknown in other species ...
Yu Bi, Xiaoliang Ren, Cheung Yan, Jiaofang Shao, Dongying Xie, Zhongying Zhao   +5 more
doaj   +1 more source

White Matter Microstructural Abnormalities in Neonatal Onset Genetic Epilepsy

Annals of Clinical and Translational Neurology, EarlyView.
ABSTRACT Objective Recent evidence indicates that epilepsy is associated with abnormal white matter. If seizures alter white matter, then the impact upon network function, epileptogenesis, and cognition could be pronounced in neonates undergoing rapid developmental myelination. Neonates with epilepsy due to nonstructural genetic causes provide a unique
Amanda G. Sandoval Karamian, Tianjia Zhu, Hao Huang, Shavonne L. Massey, Mark P. Fitzgerald, Darshana Parikh, Arastoo Vossough, Ingo Helbig, Nicholas S. Abend   +8 more
wiley   +1 more source

Tracing cancer evolution and heterogeneity using Hi-C

Nature Communications, 2023
Chromosomal rearrangements can initiate and drive cancer progression, yet it has been challenging to evaluate their impact, especially in genetically heterogeneous solid cancers.
Dan Daniel Erdmann-Pham, Sanjit Singh Batra, Timothy K. Turkalo, James Durbin, Marco Blanchette, Iwei Yeh, Hunter Shain, Boris C. Bastian, Yun S. Song, Daniel S. Rokhsar, Dirk Hockemeyer   +10 more
doaj   +1 more source

A Qualitative Analysis of Patient Perspectives and Preferences in Lupus Management to Guide Lupus Guidelines Development

Arthritis Care &Research, EarlyView.
Objective A patient‐centered approach for chronic disease management, including systemic lupus erythematosus (SLE), aligns treatment with patients’ values and preferences, leading to improved outcomes. This paper summarizes how patient experiences, perspectives, and priorities informed the American College of Rheumatology (ACR) 2024 Lupus Nephritis (LN)
Shivani Garg, Izzy Hartel, Lisa R. Sammaritano, Anca Askanase, Bonnie L. Bermas, Maria Dall'Era, Alí Duarte‐García, Victoria P. Werth, Brad Rovin, Reem A. Mustafa, Amy S. Turner, Bené Williams, Brian L. Ung, Hiya Bhavsar, Monique C. Gore‐Massy, Nahirannette Pulido, Natacha Guerrero, Natalie M. Smith, Wambui Machua, Linda T. Hiraki, Mary Beth Son   +20 more
wiley   +1 more source

Hi-C contact map of the chromosomal pseudomolecules SOL_r2.0_pseudomolecule.

Hi-C contact map of the chromosomal pseudomolecules SOL_r2.0_pseudomolecule.
Yutaka Suzuki (1379), Atsushi Toyoda (24202), Takayuki Osabe (6933074), Babil Pachakkil (9943091), Keisuke Tanaka (810441), Akane Haseda (3316443), Yuki Sudo (163292), Hideki Hirakawa (103059), Kaoru Yamano (18018230), Keisuke Iwabuchi (18018233), Yasuyuki Onodera (3316440)   +10 more
core   +1 more source

Hi-C library statistics for different datasets used in this paper.

, 2019
Mapped read pairs denote the total number of Hi-C read pairs aligned before mapping quality filtering. Intra-contig read pairs account for the read pairs where both the reads align to same contig and inter-contig read pairs account for the read pairs ...
Arang Rhie (7296419), Adam M. Phillippy (3174717), Anthony Schmitt (3447419), Jay Ghurye (4244236), Brian P. Walenz (7296422), Sergey Koren (553953), Siddarth Selvaraj (278268), Mihai Pop (48593)   +7 more
core   +1 more source

Validation of the Pediatric Arthritis Ultrasound Scoring System for the Elbow, Wrist, and Finger Joints in Children With Juvenile Idiopathic Arthritis

Arthritis Care &Research, EarlyView.
Objective We aimed to validate the Pediatric Arthritis Ultrasound Scoring System (PAUSS) for upper extremity joints in children with juvenile idiopathic arthritis (JIA). Methods Children with JIA were evaluated for elbow, wrist, or finger arthritis by clinical examination (CE) and musculoskeletal ultrasound (MSUS) with images scored according to the ...
Patricia Vega‐Fernandez, Pinar Ozge Avar‐Aydin, Kelly Rogers, Daniel J. Lovell, Jennifer Huggins, Alexei Grom, Hermine I. Brunner, Grant S. Schulert, Sheila T. Angeles‐Han, Mekibib Altaye, Amy Cassedy, Arthur B. Meyers, Tracy V. Ting   +12 more
wiley   +1 more source

Computational tools for Hi‐C data analysis

Quantitative Biology, 2017
BackgroundIn eukaryotic genome, chromatin is not randomly distributed in cell nuclei, but instead is organized into higher‐order structures. Emerging evidence indicates that these higher‐order chromatin structures play important roles in regulating genome functions such as transcription and DNA replication.
Zhijun Han, Gang Wei
openaire   +1 more source

Synteny and rearrangement alignments - Hi-C

, 2023
SyRI output files for all pairs of genome alignments for E. melliodora Hi-C analysis. Each file contains the syntenc and rearranged sequences between each pair of genomes.
Scott Ferguson (9952223)
core   +1 more source