Results 101 to 110 of about 20,056,738 (185)

Letter from Hi Allman, on board U. S. S. Bremerton, to Johnny, August 14, 1955

open access: yes, 1955
A letter from Hi Allman, Assistant Navigator on the cruiser USS Bremerton, dated August 14, 1955, to a friend named Johnny, describing the vessel's cruise from Long Beach, California, to Okinawa ...
Allman, Hi
core  

Additional file 1 of Characterizing chromatin interactions of regulatory elements and nucleosome positions, using Hi-C, Micro-C, and promoter capture Micro-C

open access: yes, 2022
Additional file 1: Table S1. Datasets used in this study. (A) data availability (B) QC statistics of Micro-C, Hi-C, and promoter capture Micro-C data (C) Additional metrics of promoter capture Micro-C ...
Zexun Wu (15169523)   +2 more
core   +1 more source

Inoculated mammary carcinoma-associated fibroblasts: contribution to hormone independent tumor growth

open access: yesBMC Cancer, 2010
Background Increasing evidence has underscored the role of carcinoma associated fibroblasts (CAF) in tumor growth. However, there are controversial data regarding the persistence of inoculated CAF within the tumors.
Lanari Claudia   +6 more
doaj   +1 more source

Hi-C protocol v1

open access: yes
Hi-C protocol for ESC DE differentiation time course.
Renhe Luo, Michael Beer, Danwei Huangfu
openaire   +1 more source

LLM-assisted development of Rust for high-performance bioinformatics software: practices, workflows, and boundaries

open access: yesGenomics Communications
As high-throughput sequencing datasets continue to grow, the dominant bottlenecks in bioinformatics software are increasingly engineering concerns, such as input/output throughput, compression and decompression, memory allocation, and long-term ...
Zhou-Geng Xu, Guihui Qin
doaj   +1 more source

The Bioinformatic Applications of Hi-C and Linked Reads

open access: yesGenomics, Proteomics & Bioinformatics
Abstract Long-range sequencing grants insight into additional genetic information beyond what can be accessed by both short reads and modern long-read technology. Several new sequencing technologies, such as “Hi-C” and “Linked Reads”, produce long-range datasets for high-throughput and high-resolution genome analyses, which are rapidly ...
Libo Jiang   +8 more
openaire   +2 more sources

ScHiCAtt: Enhancing single-cell Hi-C data resolution using attention-based models

open access: yesComputational and Structural Biotechnology Journal
The spatial organization of chromatin is fundamental to gene regulation and essential for proper cellular function. The Hi-C technique remains one of the leading methods for unraveling 3D genome structures; however, limited resolution, data sparsity, and
Rohit Menon   +2 more
doaj   +1 more source

Draft genome of Angelica Biserrata, a traditional Chinese medicinal herb of the Angelica genus (Apiaceae)

open access: yesBMC Genomic Data
Objectives Angelica biserrata (commonly known as “Duhuo”), a traditional Chinese medicinal herb of the genus Angelica within the Apiaceae family, is clinically valued for its therapeutic effects in dispelling wind-dampness (a TCM syndrome manifesting as ...
Yuan-jiang Xu   +5 more
doaj   +1 more source

Significance in scale space for Hi-C data

open access: yesBioinformatics
Abstract Motivation Hi-C technology has been developed to profile genome-wide chromosome conformation. So far Hi-C data have been generated from a large compendium of different cell types and different tissue types. Among different chromatin conformation units, chromatin loops were found to play a key
Rui Liu   +3 more
openaire   +3 more sources

INVESTIGATION OF THE SPATIAL GENOME ORGANIZATION OF MOUSE SPERM AND FIBROBLASTS BY THE Hi-C METHOD

open access: yesВавиловский журнал генетики и селекции, 2015
The spatial organization of an eukaryotic genome plays an important role in the control of nuclear gene expression. The new Hi-C method allows investigation of the three-dimensional architecture of whole genomes.
N. R. Battulin   +6 more
doaj  

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