Results 81 to 90 of about 20,056,738 (185)

Hi-C and RNA-chromatin interactions for lncRNA ENSG00000233429.

The top track shows the genomic location of the interaction, followed by tracks showing the Hi-C annotated interactions between lncRNA ENSG00000233429 and its candidate target genes in different cell types. (TIF)
Imad Abugessaisa (627440), Yasushi Okazaki (3100), Josée Dostie (262897), Takeya Kasukawa (3041), Michiel J. L. de Hoon (11434447), Chikashi Terao (137128), Jordan A. Ramilowski (2259964), Lisa J. Strug (8293947), Chung Chau Hon (4520500), Jessica Severin (178475), Andrey I. Sigorskikh (18510105), Howard Y. Chang (215450), Michael M. Hoffman (5846618), Masayoshi Itoh (15728), Ken Yagi (246069), Chi Wai Yip (15068455), Mickaël Mendez (3864016), Piero Carninci (3015), Ivan V. Kulakovskiy (7592957), Saumya Agrawal (3441386), Tanvir Alam (638619), Kayoko Yasuzawa (18510108), Jay W. Shin (9030986), Vsevolod J. Makeev (7592954), Juha Kere (11900), Naoto Kondo (32868), Masaru Koido (14059995), Andrey Buyan (18510102), Yunjing Li (644191)   +28 more
core   +1 more source

Hi-PACE/hipace: v22.06

, 2022
Dependencies AMReX: release 22.06 openPMD-api: release 0.14.4 What's Changed Open Boundaries by @AlexanderSinn in https://github.com/Hi-PACE/hipace/pull/666 fix beam particle ID in IO; save ID directly, CPU information is outdated by @SeverinDiederichs ...
Lehe, Remi, Sinn, Alexander, Diederichs, Severin, Zhang, Weiqun, Huebl, Axel, Myers, Andrew, Thévenet, Maxence   +6 more
core   +1 more source

Hi-C heatmap of P. coronata f. sp. avenae (“Pca 203”) hapB.

Hi-C heatmap of P. coronata f. sp. avenae (“Pca 203”) hapB.
Zhenyan Luo (18176939), Alistair McTaggart (18176942), Benjamin Schwessinger (223005)   +2 more
core   +1 more source

Additional file 6 of Characterizing chromatin interactions of regulatory elements and nucleosome positions, using Hi-C, Micro-C, and promoter capture Micro-C

, 2022
Additional file 6: Table S5.
Zexun Wu (15169523), Beoung Hun Lee (15256370), Suhn K. Rhie (15169526)   +2 more
core   +1 more source

3C-BASED METHODS FOR 3D GENOME ORGANIZATION ANALYSIS

Вавиловский журнал генетики и селекции, 2014
The 3D organization of an eukaryotic genome plays an important role in nuclear gene expression. Until recently, studies of this organization were limited by light microscopy and electron microscopy methods.
N. R. Battulin, V. S. Fishman, Yu. L. Orlov, A. G. Menzorov, D. A. Afonnikov, O. L. Serov   +5 more
doaj  

HiCcompare: an R-package for joint normalization and comparison of HI-C datasets

BMC Bioinformatics, 2018
Background Changes in spatial chromatin interactions are now emerging as a unifying mechanism orchestrating the regulation of gene expression. Hi-C sequencing technology allows insight into chromatin interactions on a genome-wide scale.
John C. Stansfield, Kellen G. Cresswell, Vladimir I. Vladimirov, Mikhail G. Dozmorov   +3 more
doaj   +1 more source

Hi-C First Results [PDF]

, 2013
Hi-C obtained the highest spatial and temporal resolution observatoins ever taken in the solar corona. Hi-C reveals dynamics and structure at the limit of its temporal and spatial resolution.
Cirtain, Jonathan
core  

Posterior inference of Hi-C contact frequency through sampling

Frontiers in Bioinformatics
Hi-C is one of the most widely used approaches to study three-dimensional genome conformations. Contacts captured by a Hi-C experiment are represented in a contact frequency matrix.
Yanlin Zhang, Christopher J. F. Cameron, Christopher J. F. Cameron, Mathieu Blanchette   +3 more
doaj   +1 more source

Hi-C heatmap of P. coronata f. sp. avenae (“Pca 203”) hapA.

Hi-C heatmap of P. coronata f. sp. avenae (“Pca 203”) hapA.
Zhenyan Luo (18176939), Alistair McTaggart (18176942), Benjamin Schwessinger (223005)   +2 more
core   +1 more source

Softshell turtle genome assemblies scaffolded with Hi-C data

, 2019
This dataset, associated with our prospected publication by Kadota et al., contains softshell turtle genome assemblies based on Hi-C scaffolding. See the file "Assembly_ID.xlsx" for details of the combinations of tissue, enzyme, scaffolding program and ...
Phyloinformatics Lab in RIKEN Kobe (4815111)
core   +1 more source