Results 21 to 30 of about 15,584,188 (261)
First occurrence of bidens mottle virus in Brazil: biological and molecular characterization of isolates infecting Zinnia sp. and Bidens pilosa [PDF]
Scientia Agricola, 2023 Zinnia sp. and hairy beggartick (Bidens pilosa) plants exhibiting symptoms of possible virus infection were found in the municipality of Santa Bárbara d’Oeste, São Paulo State, Brazil.Gabriel Madoglio Favara, Camila Geovana Ferro, Vinicius Henrique Bello, Felipe Franco de Oliveira, Heron Delgado Kraide, Marcos Roberto Ribeiro Junior, Renate Krause-Sakate, Elliot Watanabe Kitajima, Jorge Alberto Marques Rezende +8 moredoaj +1 more sourceDNA-based faecal dietary analysis: A comparison of qPCR and high throughput sequencing approaches [PDF]
, 2011 The genetic analysis of faecal material represents a relatively non-invasive way to study animal diet and has been widely adopted in ecological research.Michael Bunce, Haile, James, Roberto A Barrero, Jayne Houston, White Nicole E., Haile James, Belinda L. Cannell, Rebecca Oliver, Oliver, R., Dáithí C. Murray, Bellgard, M.I., Houston Jayne, Murray, D.C., Dáithí C Murray, Belinda L Cannell, White, N.E., Bellgard Matthew I., Barrero, R., Oliver Rebecca, Matthew I Bellgard, Murray Dáithí C., Cannell, B.L., Barrero Roberto A., Haile, J., Matthew I. Bellgard, White, Nicole, Houston, J., Bellgard, M., Murray, D., James Haile, Cannell, B., Barrero, R.A., Nicole E White, Bunce, M., Bunce Michael, Cannell Belinda L., Nicole E. White, Roberto A. Barrero, Bunce, Michael +38 morecore +1 more sourceHigh Throughput Sequencing for Detection of Foodborne Pathogens
Frontiers in Microbiology, 2017 High-throughput sequencing (HTS) is becoming the state-of-the-art technology for typing of microbial isolates, especially in clinical samples. Yet, its application is still in its infancy for monitoring and outbreak investigations of foods.Camilla Sekse, Arne Holst-Jensen, Ulrich Dobrindt, Gro S. Johannessen, Weihua Li, Bjørn Spilsberg, Jianxin Shi +6 moredoaj +1 more sourceMetabolic Potential, Ecology and Presence of Associated Bacteria Is Reflected in Genomic Diversity of Mucoromycotina
Frontiers in Microbiology, 2021 Mucoromycotina are often considered mainly in pathogenic context but their biology remains understudied. We describe the genomes of six Mucoromycotina fungi representing distant saprotrophic lineages within the subphylum (i.e., Umbelopsidales and ...Anna Muszewska, Alicja Okrasińska, Kamil Steczkiewicz, Olga Drgas, Małgorzata Orłowska, Urszula Perlińska-Lenart, Tamara Aleksandrzak-Piekarczyk, Katarzyna Szatraj, Urszula Zielenkiewicz, Sebastian Piłsyk, Ewa Malc, Piotr Mieczkowski, Joanna S. Kruszewska, Przemysław Bernat, Julia Pawłowska +14 moredoaj +1 more sourceSpecies identification and profiling of complex microbial communities using shotgun Illumina sequencing of 16S rRNA amplicon sequences. [PDF]
, 2013 The high throughput and cost-effectiveness afforded by short-read sequencing technologies, in principle, enable researchers to perform 16S rRNA profiling of complex microbial communities at unprecedented depth and resolution. Existing Illumina sequencing Niranjan Nagarajan, Eliza Xin Pei Ho, Andreas Wilm (7951), Hibberd, Martin Lloyd, Louie Low (400408), Nagarajan, Niranjan, Eliza Xin Pei Ho (400407), Ong, Swee Hoe, Christophe Lay (400406), Martin Lloyd Hibberd (259920), Low, Louie, Kukkillaya, Vinutha Uppoor, Andreas Wilm, Martin Lloyd Hibberd, Lay, Christophe, Niranjan Nagarajan (131213), Wilm, Andreas, Ho, Eliza Xin Pei, Vinutha Uppoor Kukkillaya (400405), Swee Hoe Ong, Louie Low, Swee Hoe Ong (400404), Vinutha Uppoor Kukkillaya, Christophe Lay +23 morecore +1 more sourceHigh-throughput SuperSAGE for digital gene expression analysis of multiple samples using next generation sequencing [PDF]
, 2010 We established a protocol of the SuperSAGE technology combined with next-generation sequencing, coined "High- Throughput (HT-) SuperSAGE". SuperSAGE is a method of digital gene expression profiling that allows isolation of 26-bp tag fragments from ...Schroth, G.P., Terauchi, Ryohei, Hideo Matsumura, Schroth Gary P, Krüger Detlev H., Kentaro Yoshida, Kahl, Guenter, Kahl, G., Fujibe, Takahiro, Krueger, Detlev H, Takahiro Fujibe, Luo, Shujun, Fujibe, T., Terauchi Ryohei, Eiji Kimura, Barrero, Roberto A, Yoshida Kentaro, Luo, S., Barrero Roberto A, Terauchi Ryohei, Albertyn Zayed, Luo, Shujun, Shujun Luo, Kimura, Eiji, Barrero, R.A., Schroth, Gary P., Terauchi, Ryohei, Detlev H Krüger, Yoshida Kentaro, Albertyn, Z., Ryohei Terauchi, Roberto A Barrero, Yoshida, Kentaro, Kahl Günter, Matsumura, Hideo, Luo Shujun, Krueger Detlev H, Albertyn Zayed, Gary P. Schroth, Kahl Guenter, Matsumura, Hideo, Fujibe Takahiro, Matsumura Hideo, Yoshida, K., Fujibe, Takahiro, Schroth Gary P., Krüger, D.H., Kahl, Günter, Luo Shujun, Krüger, Detlev H., Kimura, Eiji, Gary P Schroth, Albertyn, Zayed, Matsumura Hideo, Barrero Roberto A., Schroth, Gary P, Zayed Albertyn, Kimura, E., Terauchi, R., Kimura Eiji, Detlev H. Krüger, Albertyn, Zayed, Matsumura, H., Yoshida, Kentaro, Fujibe Takahiro, Barrero, Roberto A., Kimura Eiji, Roberto A. Barrero, Günter Kahl +68 morecore +1 more sourceIon torrent high throughput mitochondrial genome sequencing (HTMGS).
PLoS ONE, 2019 The implementation and popularity of next generation sequencing (NGS) has led to the development of various rapid whole mitochondrial genome sequencing techniques. We summarise an efficient and cost-effective NGS approach for mitochondrial genomic DNA in N R Harvey, C L Albury, S Stuart, M C Benton, D A Eccles, J R Connell, H G Sutherland, R J N Allcock, R A Lea, L M Haupt, L R Griffiths +10 moredoaj +1 more sourceTargeted high throughput sequencing in hereditary ataxia and spastic paraplegia. [PDF]
PLoS ONE, 2017 Hereditary ataxia and spastic paraplegia are heterogeneous monogenic neurodegenerative disorders. To date, a large number of individuals with such disorders remain undiagnosed.Zafar Iqbal, Siri L Rydning, Iselin M Wedding, Jeanette Koht, Lasse Pihlstrøm, Aina H Rengmark, Sandra P Henriksen, Chantal M E Tallaksen, Mathias Toft +8 moredoaj +1 more sourceSpatiotemporal characteristics of environmental microbial communities and resistomes in intensive care units of a tertiary hospital in northwest China
Frontiers in MicrobiologyBackgroundIntensive care units (ICUs) are high-risk settings for healthcare-acquired infections (HAIs). It is essential to characterize the microorganisms and antimicrobial resistance genes (ARGs) in ICU environments for prevention and control of HAIs ...Jiexi Yan, Jiexi Yan, Qingmiao Ren, Qingmiao Ren, Xiaomin He, Haiyun Du, Haiyun Du, Lijuan He, Zhaoyu Zheng, Zhaoyu Zheng, Yaya Qi, Yaya Qi, Xiaohong Xian, Xiaohong Xian +13 moredoaj +1 more sourceSmall molecule regulators of microRNAs identified by high-throughput screen coupled with high-throughput sequencing
Nature Communications, 2023 MicroRNAs (miRNAs) regulate fundamental biological processes by silencing mRNA targets and are dysregulated in many diseases. Therefore, miRNA replacement or inhibition can be harnessed as potential therapeutics.Lien D. Nguyen, Zhiyun Wei, M. Catarina Silva, Sergio Barberán-Soler, Jiarui Zhang, Rosalia Rabinovsky, Christina R. Muratore, Jonathan M. S. Stricker, Colin Hortman, Tracy L. Young-Pearse, Stephen J. Haggarty, Anna M. Krichevsky +11 moredoaj +1 more source
