Results 31 to 40 of about 902,297 (302)
High throughput error corrected Nanopore single cell transcriptome sequencing
Nature Communications, 2020 Droplet-based high throughput single cell sequencing techniques can often lose information on transcript splicing and heterogenity. Here the authors introduce ScNaUmi-seq, which uses Oxford Nanopore sequencing and barcoding to generate high accuracy full
Kevin Lebrigand +3 more
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High-throughput sequencing of SARS-CoV-2 in wastewater provides insights into circulating variants
medRxiv, 2021 Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) emerged from a zoonotic spill-over event and has led to a global pandemic. The public health response has been predominantly informed by surveillance of symptomatic individuals and contact ...
R. Fontenele +27 more
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Application of Nanopore Sequencing for High Throughput Genotyping in Horses
Animals, 2023 Nanopore sequencing is a third-generation biopolymer sequencing technique that relies on monitoring the changes in an electrical current that occur as nucleic acids are passed through a protein nanopore.
Artur Gurgul +6 more
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Qualimap 2: advanced multi-sample quality control for high-throughput sequencing data
Bioinform., 2015 Motivation: Detection of random errors and systematic biases is a crucial step of a robust pipeline for processing high-throughput sequencing (HTS) data.
K. Okonechnikov +2 more
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High-Throughput Microdissection for Next-Generation Sequencing. [PDF]
PLoS ONE, 2016 Precision medicine promises to enhance patient treatment through the use of emerging molecular technologies, including genomics, transcriptomics, and proteomics.
Avi Z Rosenberg +17 more
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High throughput genetic sequence analysis [PDF]
Proceedings of the 11th ACM Conference on Computing Frontiers, 2014 We present an application paradigm in which an unsupervised machine learning approach is applied to high dimensional influenza sequence datasets: (1) human A/H3N2, (2) avian H5, and (3) North American swine influenza H3N2 virus. Interesting visual patterns observed in the A/H3N2 influenza virus led us to hypothesize that vaccination could be one of the
Ham Ching Lam +3 more
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GigaScience, 2017 Quality control (QC) and preprocessing are essential steps for sequencing data analysis to ensure the accuracy of results. However, existing tools cannot provide a satisfying solution with integrated comprehensive functions, proper architectures, and ...
Yuxin Chen +14 more
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High Throughput Sequencing for Detection of Foodborne Pathogens
Frontiers in Microbiology, 2017 High-throughput sequencing (HTS) is becoming the state-of-the-art technology for typing of microbial isolates, especially in clinical samples. Yet, its application is still in its infancy for monitoring and outbreak investigations of foods.
Camilla Sekse +6 more
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Frontiers in Microbiology, 2021 Mucoromycotina are often considered mainly in pathogenic context but their biology remains understudied. We describe the genomes of six Mucoromycotina fungi representing distant saprotrophic lineages within the subphylum (i.e., Umbelopsidales and ...
Anna Muszewska +14 more
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High-throughput and single-cell T cell receptor sequencing technologies
Nature Methods, 2021 T cells express T cell receptors (TCRs) composed of somatically recombined TCRα and TCRβ chains, which mediate recognition of major histocompatibility complex (MHC)–antigen complexes and drive the antigen-specific adaptive immune response to pathogens ...
J. Pai, Ansuman T. Satpathy
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