Results 1 to 10 of about 724,062 (300)

Reliability of DNA methylation measures using Illumina methylation BeadChip

open access: yesEpigenetics, 2021
Illumina BeadChips are widely utilized in epigenome-wide association studies (EWAS). Several studies have reported that many probes on these arrays have poor reliability.
Zongli Xu, Jack A Taylor
exaly   +2 more sources

Ultra-deep sequencing validates safety of CRISPR/Cas9 genome editing in human hematopoietic stem and progenitor cells

open access: yesNature Communications, 2022
As CRISPR-based therapies enter the clinic, evaluation of safety remains a critical and active area of study. Here the authors use next generation sequencing to achieve high sequencing depth and demonstrate that clinically relevant delivery of high ...
M. Kyle Cromer   +11 more
doaj   +1 more source

Bead-linked transposomes enable a normalization-free workflow for NGS library preparation

open access: yesBMC Genomics, 2018
Background Transposome-based technologies have enabled the streamlined production of sequencer-ready DNA libraries; however, current methods are highly sensitive to the amount and quality of input nucleic acid.
Stephen Bruinsma   +17 more
doaj   +1 more source

Whole-Genome Sequencing Can Identify Clinically Relevant Variants from a Single Sub-Punch of a Dried Blood Spot Specimen

open access: yesInternational Journal of Neonatal Screening, 2023
The collection of dried blood spots (DBS) facilitates newborn screening for a variety of rare, but very serious conditions in healthcare systems around the world.
David J. McBride   +13 more
doaj   +1 more source

Rational probe design for efficient rRNA depletion and improved metatranscriptomic analysis of human microbiomes

open access: yesBMC Microbiology, 2023
The microbiota that colonize the human gut and other tissues are dynamic, varying both in composition and functional state between individuals and over time.
Asako Tan   +13 more
doaj   +1 more source

The diagnostic trajectory of infants and children with clinical features of genetic disease

open access: yesnpj Genomic Medicine, 2021
We characterized US pediatric patients with clinical indicators of genetic diseases, focusing on the burden of disease, utilization of genetic testing, and cost of care.
Brock E. Schroeder   +6 more
doaj   +1 more source

Reactive gene curation to support interpretation and reporting of a clinical genome test for rare disease: Experience from over 1,000 cases

open access: yesCell Genomics, 2023
Summary: Current standards in clinical genetics recognize the need to establish the validity of gene-disease relationships as a first step in the interpretation of sequence variants.
Amanda R. Clause   +25 more
doaj   +1 more source

An automated 13.5 hour system for scalable diagnosis and acute management guidance for genetic diseases

open access: yesNature Communications, 2022
Rapid diagnosis and implementation of treatments is crucial in many genetic conditions. Here the authors describe Genome-to-Treatment, a virtual disease management system that can achieve a rapid diagnosis by expedited whole genome sequencing in 13.5 ...
Mallory J. Owen   +64 more
doaj   +1 more source

Patient-reported outcomes associated with cancer screening: a systematic review

open access: yesBMC Cancer, 2022
Background Multi-cancer early detection tests have been developed to enable earlier detection of multiple cancer types through screening. As reflected by patient-reported outcomes (PROs), the psychosocial impact of cancer screening is not yet clear.
Ashley Kim   +3 more
doaj   +1 more source

HERVs establish a distinct molecular subtype in stage II/III colorectal cancer with poor outcome

open access: yesnpj Genomic Medicine, 2021
Colorectal cancer (CRC) is one of the most lethal malignancies. The extreme heterogeneity in survival rate is driving the need for new prognostic biomarkers.
Mahdi Golkaram   +27 more
doaj   +1 more source

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