Results 81 to 90 of about 92,631 (141)

Illumina MiSeq Sequencing Reveals Correlations among Fruit Ingredients, Environmental Factors, and AMF Communities in Three Lycium Barbarum Producing Regions of China. [PDF]

Microbiol Spectr, 2022
Chen K, Huang G, Li Y, Zhang X, Lei Y, Li Y, Xiong J, Sun Y.   +7 more
europepmc   +1 more source

An optimized, amplicon-based approach for sequencing of SARS-CoV-2 from patient samples using COVIDSeq assay on Illumina MiSeq sequencing platforms. [PDF]

STAR Protoc, 2021
Bhoyar RC, Senthivel V, Jolly B, Imran M, Jain A, Divakar MK, Scaria V, Sivasubbu S.   +7 more
europepmc   +1 more source

Rumen Epithelial Communities Share a Core Bacterial Microbiota: A Meta-Analysis of 16S rRNA Gene Illumina MiSeq Sequencing Datasets. [PDF]

Front Microbiol, 2021
Anderson CJ, Koester LR, Schmitz-Esser S.   +2 more
europepmc   +1 more source

Candida auris sequencing by Illumina miSeq using Illumina DNA Prep v1

Candida auris sequencing is becoming more important for public health and surveillance. This protocol is designed to guide individuals experienced in sequencing in setting up a SOP for sequencing C. auris. This protocol is designed for Illumina short-read sequencing.
openaire   +1 more source

Whole-genome and targeted sequencing of drug-resistant Mycobacterium tuberculosis on the iSeq100 and MiSeq: A performance, ease-of-use, and cost evaluation.

PLoS Medicine, 2019
BackgroundAccurate, comprehensive, and timely detection of drug-resistant tuberculosis (TB) is essential to inform patient treatment and enable public health surveillance. This is crucial for effective control of TB globally. Whole-genome sequencing (WGS)
Rebecca E Colman, Aurélien Mace, Marva Seifert, Jonathan Hetzel, Haifa Mshaiel, Anita Suresh, Darrin Lemmer, David M Engelthaler, Donald G Catanzaro, Amanda G Young, Claudia M Denkinger, Timothy C Rodwell   +11 more
doaj   +1 more source

Comparison of the performance of MiSeq and NovaSeq in oral microbiome study

Journal of Oral Microbiology
Objective Next generation sequencing is commonly used to characterize the microbiome structure. MiSeq is most commonly used to analyze the microbiome due to its relatively long read length. Illumina also introduced the 250 × 2 chip for NovaSeq.
Hyejung Han, Hyo-Jung Lee, Keun-Suh Kim, Jin Chung, Hee Sam Na   +4 more
doaj   +1 more source

Towards genomic medicine: a tailored next-generation sequencing panel for hydroxyurea pharmacogenomics in Tanzania

BMC Medical Genomics
Background Pharmacogenomics of hydroxyurea is an important aspect in the management of sickle cell disease (SCD), especially in the era of genomic medicine.
Siana Nkya, Collin Nzunda, Emmanuel Saukiwa, Frida Kaywanga, Eliud Buberwa, David Solomon, Heavenlight Christopher, Doreen Ngowi, Julieth Johansen, Florence Urio, Josephine Mgaya, Salman Karim, Mohamed Zahir Alimohamed, Raphael Z. Sangeda, Clara Chamba, Emile R. Chimusa, Enrico Novelli, Julie Makani   +17 more
doaj   +1 more source

High-throughput rapid amplicon sequencing for multilocus sequence typing of Mycoplasma ovipneumoniae from archived clinical DNA samples

Frontiers in Veterinary Science
IntroductionSpillover events of Mycoplasma ovipneumoniae have devastating effects on the wild sheep populations. Multilocus sequence typing (MLST) is used to monitor spillover events and the spread of M. ovipneumoniae between the sheep populations.
Isaac Framst, Rebecca M. Wolking, Justin Schonfeld, Nicole Ricker, Janet Beeler-Marfisi, Gabhan Chalmers, Pauline L. Kamath, Grazieli Maboni, Grazieli Maboni   +8 more
doaj   +1 more source

Closed Genome Sequences and Antimicrobial Resistance Profiles of Eight Wild Bird Salmonella Isolates Obtained with MinION and Illumina MiSeq Sequencing. [PDF]

Microbiol Resour Announc, 2020
Naushad S, Duceppe MO, Dupras AA, Gao R, Ogunremi D.   +4 more
europepmc   +1 more source

Comparing dental plaque microbiome diversity of extrinsic black stain in the primary dentition using Illumina MiSeq sequencing technique. [PDF]

BMC Oral Health, 2019
Chen L, Zhang Q, Wang Y, Zhang K, Zou J.
europepmc   +1 more source