Results 21 to 30 of about 173,111 (241)

Comparative performance of the BGI and Illumina sequencing technology for single-cell RNA-sequencing

, 2020
The libraries generated by high-throughput single cell RNA-sequencing (scRNA-seq) platforms such as the Chromium from 10× Genomics require considerable amounts of sequencing, typically due to the large number of cells.
Jiang, Feng, Hewitt, Alex W., Beckhouse, Anthony, Powell, Joseph E., Wing, Kristof, Andersen, Stacey, Lukowski, Samuel W., Hung, Sandy S. C., Zhang, Wenwei, Shi, Lei, Daniszewski, Maciej, Nguyen, Quan, Senabouth, Anne, Pébay, Alice, Fink, Lynn, Shi, Qianyu   +15 more
core   +3 more sources

Complete chloroplast genome data of Ranunculus membranaceus (Ranunculaceae), an important medicinal plant species

Data in Brief, 2023
The perennial alpine herb Ranunculus membranaceus (Ranunculaceae) has significant medicinal value. The complete chloroplast genome of R. membranaceus was sequenced by high-throughput Illumina sequencing Platform Illumina NovaSeq 6000. The circular genome
Yanmei Ren, Mengyan Wang, Zuoyi Wang, Lin Wu, Ji-Zhong Wan, Huakun Zhou, Zhen Ma, Chunhui Zhang   +7 more
doaj   +1 more source

16S rRNA gene V4 amplicon sequence data from <i>Acropora pulchra</i> tissue microbiome samples from Madura Island, Indonesia. [PDF]

Microbiol Resour Announc
We report 16S rRNA gene V4 amplicon sequence data from five Acropora pulchra tissue microbiome samples collected from Madura Island, Indonesia, in September 2020. Raw reads are generated on the Illumina NovaSeq
Alina DN, Pasaribu B, Maqbul I, Sari QW, Rachmawati R.   +4 more
europepmc   +2 more sources

NovaSeq Cohort - Raw Counts

, 2022
Raw counts associated with the NovaSeq ALS ...
Jarrett Eshima (13813720)
core   +1 more source

The complete mitochondrial genome of Sanghuangporus vaninii Zhehuang-1 (Hymenochaetales, Basidiomycota)

Mitochondrial DNA. Part B. Resources, 2021
In this study, the complete mitochondrial genome of Sanghuangporus vaninii Zhehuang-1 was determined. Genomic DNA samples individually collected from a population in southeastern China (Qiandaohu, Zhejiang Province, N29°44′24′′, E118°52′48′′) were ...
Tingting Song, Fei Xu, Yingyue Shen, Lijun Fan, Weiming Cai   +4 more
doaj   +1 more source

The complete chloroplast genome of Meconopsis pinnatifolia and Meconopsis paniculata

, 2023
Two species, Meconopsis pinnatifolia and Meconopsis paniculate, were newly collected from Qinghai-Tibet plateau (QTP), China at altitudes of 3,944m and 3,632m respectively in 2022.
Shuqi Zhao (16946760)
core   +1 more source

Isolating peripheral blood mononuclear cells from HIV-infected patients for single-cell RNA sequencing and integration analysis

STAR Protocols, 2023
Summary: Single-cell RNA sequencing (scRNA-seq) of peripheral blood mononuclear cells (PBMCs) allows the dissection of transcriptional changes in immune cells with HIV infection. Here, we isolate PBMCs from HIV-infected individuals.
Jie Jia, Yu Zhao, Jian-Hua Wang, Yi-Qun Kuang   +3 more
doaj   +1 more source

Analyses of DNA-protein interaction for four R2R3-MYB family transcription factors linked to wood formation in Eucalyptus using DAP-seq

, 2023
DAP-seq was used to identify transcription factor binding sites for EgrMYB1 (Eucgr.G01774), EgrMYB2 (Eucgr.G03385), EgrMYB122 (Eucgr.J01601) and EgrMYB135 (Eucgr.K02297) transcription factors. Sequencing was carried out on an Illumina NovaSeq 6000 (PE150)
Lazarus Takawira (17547396)
core   +1 more source

Highly comparable metabarcoding results from MGI-Tech and Illumina sequencing platforms [PDF]

PeerJ, 2021
With the developments in DNA nanoball sequencing technologies and the emergence of new platforms, there is an increasing interest in their performance in comparison with the widely used sequencing-by-synthesis methods.
Sten Anslan, Vladimir Mikryukov, Kęstutis Armolaitis, Jelena Ankuda, Dagnija Lazdina, Kristaps Makovskis, Lars Vesterdal, Inger Kappel Schmidt, Leho Tedersoo   +8 more
doaj   +2 more sources

Rhizobium acaciae sp. nov., a new nitrogen-fixing symbiovar isolated from root nodules of Acacia saligna in Tunisia

, 2023
International audienceThe draft genome sequences of 1AS11 T , 1AS12 and 1AS13 were deposited under the accession numbers JAPCZM000000000, JAPCZN000000000 and JAPCZO000000000, respectively.The Illumina NovaSeq 6000 raw reads are deposited in the Sequence ...
Ellouze, Walid, Walid Ellouze, Jihed Hsouna, Courty, Pierre-Emmanuel, Oubla, M'Hamed, Daniel Wipf, Rahi, Praveen, Jia-Cheng Han, Mnasri, Bacem, Hsouna, Jihed, Maroua Mansouri, Bacem Mnasri, Ilahi, Houda, El Idrissi, Mustapha, Missbah, M'hamed Oubla, Han, Jia-Cheng, Zhang, Xiao, Xia, Lamrabet, Mouad, Takwa Gritli, James T. Tambong, Mansouri, Maroua, Mustapha Missbah El Idrissi, Mouad Lamrabet, Tambong, James, T, Gritli, Takwa, Wipf, Daniel, Xiao Xia Zhang, Pierre Emmanuel Courty, Praveen Rahi, Houda Ilahi   +29 more
core   +1 more source