Results 61 to 70 of about 1,311,956 (360)

Transcriptome sequencing of sesame (Sesamum indicum) using Illumina Platform

The Indian Journal of Agricultural Sciences, 2023
Sesame is an important oil seed crop worldwide and has essential health and medicinal values. In the present study, a high-throughput transcriptome sequencing of sesame was performed using Illumina paired-end sequencing technology for gene and marker ...
P SUPRIYA, A R RAO, K V BHAT
doaj   +1 more source

Complete Genome Sequence of a Divergent Human Rhinovirus C Isolate from an Infant with Severe Community-Acquired Pneumonia in Colorado, USA. [PDF]

, 2017
Here, we report the genome sequence of a divergent human rhinovirus C isolate identified from an infant with a severe community-acquired respiratory infection. RNA sequencing performed on an Illumina platform identified reads aligning to human rhinovirus
DeRisi, Joseph L, Langelier, Charles, Mourani, Peter M, Sontag, Marci K, White, Corin V   +4 more
core   +2 more sources

Comparison of the sequencing bias of currently available library preparation kits for Illumina sequencing of bacterial genomes and metagenomes

DNA Research, 2019
In bacterial genome and metagenome sequencing, Illumina sequencers are most frequently used due to their high throughput capacity, and multiple library preparation kits have been developed for Illumina platforms.
Mitsuhiko P. Sato, Yoshitoshi Ogura, Keiji Nakamura, Ruriko Nishida, Yasuhiro Gotoh, Masahiro Hayashi, Junzo Hisatsune, M. Sugai, Itoh Takehiko, Tetsuya Hayashi   +9 more
semanticscholar   +1 more source

Clinical value of metagenomic next-generation sequencing by Illumina and Nanopore for the detection of pathogens in bronchoalveolar lavage fluid in suspected community-acquired pneumonia patients

Frontiers in Cellular and Infection Microbiology, 2022
At present, metagenomic next-generation sequencing (mNGS) based on Illumina platform has been widely reported for pathogen detection. There are few studies on the diagnosis of major pathogens and treatment regulation using mNGS based on Illumina versus ...
Jing Zhang, Lin Gao, Chi Zhu, Jiajia Jin, Chao Song, Hang Dong, Zhenzhong Li, Zheng Wang, Yubao Chen, Zhenhua Yang, Yan Tan, Li Wang   +11 more
semanticscholar   +1 more source

Insights into bacterioplankton community structure from Sundarbans mangrove ecoregion using Sanger and Illumina MiSeq sequencing approaches: A comparative analysis

Genomics Data, 2017
Next generation sequencing using platforms such as Illumina MiSeq provides a deeper insight into the structure and function of bacterioplankton communities in coastal ecosystems compared to traditional molecular techniques such as clone library approach ...
Anwesha Ghosh, Punyasloke Bhadury
doaj   +1 more source

Characterization of duplicate gene evolution in the recent natural allopolyploid Tragopogon miscellus by next-generation sequencing and Sequenom iPLEX MassARRAY genotyping [PDF]

, 2010
The definitive version is available at www.blackwell-synergy ...
Adams, Adams, Adams, Ainouche, Barbazuk, Bottley, Buggs, Buggs, Buggs, Cannon, Chaisson, Chaudhary, Chen, Chen, Cheung, Cheung, Cook, Cook, Dong, Doyle, Dunstan, Ellegren, Elmer, Emrich, Eveland, Feldman, Ferguson, Flagel, Flagel, Gabriel, Gaeta, Goetz, Guo, Gut, Harr, Hegarty, Hegarty, Hillier, Holt, Hudson, Johnson, Joly, Judd, Kashkush, Kihara, Kim, Kim, Kovarik, Kwok, Levy, Lim, Lim, Liu, Lynch, Margulies, Marth, Matyasek, Mavrodiev, Novaes, Novak, Ownbey, Pavy, Petit, Quackenbush, Renaut, Sadava, Slate, Soltis, Soltis, Soltis, Soltis, Soltis, Song, Stebbins, Stupar, Swanson-Wagner, Tate, Tate, Tate, Udall, Van Bers, Van Tassell, Vera, Wang, Wang, Whittall, Wolf   +86 more
core   +1 more source

The performance of metagenomic next-generation sequencing in diagnosing pulmonary infectious diseases using authentic clinical specimens: The Illumina platform versus the Beijing Genomics Institute platform

Frontiers in Pharmacology, 2023
Introduction: Metagenomic next-generation sequencing (mNGS) has been increasingly used to detect infectious organisms and is rapidly moving from research to clinical laboratories.
Shuangyu Han, Zhan Zhao, Lei Yang, Jie Huang, Yubao Wang, Jing Feng   +5 more
doaj   +1 more source

Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads

bioRxiv, 2016
The Illumina DNA sequencing platform generates accurate but short reads, which can be used to produce accurate but fragmented genome assemblies. Pacific Biosciences and Oxford Nanopore Technologies DNA sequencing platforms generate long reads that can ...
R. Wick, L. Judd, C. Gorrie, K. Holt
semanticscholar   +1 more source

Forensic SNP genotyping using nanopore MinION sequencing [PDF]

, 2017
One of the latest developments in next generation sequencing is the Oxford Nanopore Technologies' (ONT) MinION nanopore sequencer. We studied the applicability of this system to perform forensic genotyping of the forensic female DNA standard 9947 A using
Cornelis, Senne, Deforce, Dieter, Deleye, Lieselot, Gansemans, Yannick, Van Nieuwerburgh, Filip   +4 more
core   +2 more sources

De novo assembly of transcriptomes, mining, and development of novel EST-SSR markers in Curcuma alismatifolia (Zingiberaceae family) through Illumina sequencing

Scientific Reports, 2019
Curcuma alismatifolia widely used as an ornamental plant in Thailand and Cambodia. This species of herbaceous perennial from the Zingiberaceae family, includes cultivars with a wide range of colours and long postharvest life, and is used as an ornamental
S. Taheri, S. Taheri, T. Abdullah, M. Rafii, J. Harikrishna, S. Werbrouck, C. Teo, M. Sahebi, P. Azizi   +8 more
semanticscholar   +1 more source