Results 41 to 50 of about 11,169 (113)

Microbiome Profiling by Illumina Sequencing of Combinatorial Sequence-Tagged PCR Products

open access: yesPLoS ONE, 2010
28 pages, 13 ...
Gloor, Gregory B.   +6 more
openaire   +7 more sources

A large genome center's improvements to the Illumina sequencing system [PDF]

open access: yesNature Methods, 2008
The Wellcome Trust Sanger Institute is one of the world's largest genome centers, and a substantial amount of our sequencing is performed with 'next-generation' massively parallel sequencing technologies: in June 2008 the quantity of purity-filtered sequence data generated by our Genome Analyzer (Illumina) platforms reached 1 terabase, and our average ...
Michael A, Quail   +7 more
openaire   +2 more sources

Comparison of the MGISEQ-2000 and Illumina HiSeq 4000 sequencing platforms for RNA sequencing [PDF]

open access: yesGenomics & Informatics, 2019
Currently, Illumina sequencers are the globally leading sequencing platform in the next-generation sequencing market. Recently, MGI Tech launched a series of new sequencers, including the MGISEQ-2000, which promise to deliver high-quality sequencing data
Sol A Jeon   +6 more
doaj   +1 more source

leeHom: adaptor trimming and merging for Illumina sequencing reads [PDF]

open access: yesNucleic Acids Research, 2014
Abstract The sequencing of libraries containing molecules shorter than the read length, such as in ancient or forensic applications, may result in the production of reads that include the adaptor, and in paired reads that overlap one another.
Renaud, Gabriel   +2 more
openaire   +2 more sources

Comparison of different sequencing techniques for identification of SARS-CoV-2 variants of concern with multiplex real-time PCR.

open access: yesPLoS ONE, 2022
As different SARS-CoV-2 variants emerge and with the continuous evolvement of sub lineages of the delta variant, it is crucial that all countries carry out sequencing of at least >1% of their infections, in order to detect emergence of variants with ...
Diyanath Ranasinghe   +11 more
doaj   +1 more source

The performance of metagenomic next-generation sequencing in diagnosing pulmonary infectious diseases using authentic clinical specimens: The Illumina platform versus the Beijing Genomics Institute platform

open access: yesFrontiers in Pharmacology, 2023
Introduction: Metagenomic next-generation sequencing (mNGS) has been increasingly used to detect infectious organisms and is rapidly moving from research to clinical laboratories.
Shuangyu Han   +5 more
doaj   +1 more source

Bayexer: an accurate and fast Bayesian demultiplexer for Illumina sequences [PDF]

open access: yesBioinformatics, 2015
Abstract Summary: Demultiplexing is used after high-throughput sequencing to in silico assign reads to the samples of origin based on the sequenced reads of the indices. Existing demultiplexing tools based on the similarity between the read index and the reference index sequences may fail to provide satisfactory results on low-quality ...
Haisi Yi, Zhe Li, Tao Li, Jindong Zhao
openaire   +2 more sources

Systematic Comparison of Nanopore and Illumina Sequencing for the Detection of Plant Viruses and Viroids Using Total RNA Sequencing Approach

open access: yesFrontiers in Microbiology, 2022
High-throughput sequencing (HTS) has become an important tool for plant virus detection and discovery. Nanopore sequencing has been rapidly developing in the recent years and offers new possibilities for fast diagnostic applications of HTS.
Anja Pecman   +7 more
doaj   +1 more source

Reliable variant calling during runtime of Illumina sequencing [PDF]

open access: yesScientific Reports, 2018
Abstract The sequential paradigm of data acquisition and analysis in next-generation sequencing leads to high turnaround times for the generation of interpretable results. We combined a novel real-time read mapping algorithm with fast variant calling to obtain reliable variant calls still during the sequencing process.
Loka, Tobias P.   +2 more
openaire   +2 more sources

A Short Review on Illumina Sequencing Technology

open access: yesAustin Journal of Veterinary Science & Animal Husbandry, 2022
DNA sequencing is that the method of crucial the supermolecule sequence – the order of nucleotides in deoxyribonucleic acid. It includes any methodology or technology that’s accustomed verify the order of the four bases: A, guanine, cytosine, and T. Illumina technology is sequencing by synthesis approach and is presently the foremost used technology ...
openaire   +1 more source

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