Results 21 to 30 of about 32,259 (261)

The tail of cryptochromes: an intrinsically disordered cog within the mammalian circadian clock

open access: yesCell Communication and Signaling, 2020
Cryptochrome (CRY) proteins play an essential role in regulating mammalian circadian rhythms. CRY is composed of a structured N-terminal domain known as the photolyase homology region (PHR), which is tethered to an intrinsically disordered C-terminal ...
Gian Carlo G. Parico, Carrie L. Partch
doaj   +1 more source

Vesicle Clustering in a Living Synapse Depends on a Synapsin Region that Mediates Phase Separation

open access: yesCell Reports, 2020
Summary: Liquid-liquid phase separation is an increasingly recognized mechanism for compartmentalization in cells. Recent in vitro studies suggest that this organizational principle may apply to synaptic vesicle clusters. Here we test this possibility by
Arndt Pechstein   +8 more
doaj   +1 more source

Forkhead followed by disordered tail: The intrinsically disordered regions of FOXO3a [PDF]

open access: yesIntrinsically Disordered Proteins, 2015
Forkhead box Class O is one of 19 subfamilies of the Forkhead box family, comprising 4 human transcription factors: FOXO1, FOXO3a, FOXO4, and FOXO6, which are involved in many crucial cellular processes. FOXO3a is a tumor suppressor involved in multiple physiological and pathological processes, and plays essential roles in metabolism, cell cycle arrest,
Feng, Wang   +2 more
openaire   +2 more sources

The Intrinsically Disordered Region of ExbD Is Required for Signal Transduction [PDF]

open access: yesJournal of Bacteriology, 2019
The TonB system is a virulence factor for Gram-negative pathogens. The mechanism by which cytoplasmic membrane proteins of the TonB system transduce an electrochemical gradient into mechanical energy is a long-standing mystery. TonB, ExbB, and ExbD primary amino acid sequences are characterized by regions of predicted intrinsic ...
Kopp, Dale R., Postle, Kathleen
openaire   +3 more sources

Expanded Interactome of the Intrinsically Disordered Protein Dss1

open access: yesCell Reports, 2018
Summary: Dss1 (also known as Sem1) is a conserved, intrinsically disordered protein with a remarkably broad functional diversity. It is a proteasome subunit but also associates with the BRCA2, RPA, Csn12-Thp1, and TREX-2 complexes.
Signe M. Schenstrøm   +7 more
doaj   +1 more source

Structural assessment of the full-length wild-type tumor suppressor protein p53 by mass spectrometry-guided computational modeling

open access: yesScientific Reports, 2023
The tetrameric tumor suppressor p53 represents a great challenge for 3D-structural analysis due to its high degree of intrinsic disorder (ca. 40%). We aim to shed light on the structural and functional roles of p53’s C-terminal region in full-length ...
Alessio Di Ianni   +8 more
doaj   +1 more source

Evolutionary fine-tuning of residual helix structure in disordered proteins manifests in complex structure and lifetime

open access: yesCommunications Biology, 2023
Evolution-guided mutagenesis and biophysical analysis reveal that residual helical structure in the binding region of an intrinsically disordered protein regulates the lifetime of its complex by affecting its dissociation.
Steffie Elkjær   +6 more
doaj   +1 more source

Mutual induced-fit mechanism drives binding between intrinsically disordered Bim and cryptic binding site of Bcl-xL

open access: yesCommunications Biology, 2023
Dynamic docking simulations reveal the interactions and conformational changes of the intrinsically disordered region of Bim and its cryptic binding site in Bcl-xL, a pro-survival protein involved in cancer progression.
Gert-Jan Bekker   +4 more
doaj   +1 more source

Compositional Bias of Intrinsically Disordered Proteins and Regions and Their Predictions

open access: yesBiomolecules, 2022
Intrinsically disordered regions (IDRs) carry out many cellular functions and vary in length and placement in protein sequences. This diversity leads to variations in the underlying compositional biases, which were demonstrated for the short vs. long IDRs. We analyze compositional biases across four classes of disorder: fully disordered proteins; short
Bi Zhao, Lukasz Kurgan
openaire   +3 more sources

Small molecules targeting the disordered transactivation domain of the androgen receptor induce the formation of collapsed helical states

open access: yesNature Communications, 2022
In this work the authors report atomically detailed computer simulations revealing the binding mechanisms of small molecule drugs to an intrinsically disordered region of the androgen receptor, a castration-resistant prostate cancer drug target.
Jiaqi Zhu   +2 more
doaj   +1 more source

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