Results 131 to 140 of about 118,614 (242)

An Energy‐Corrected Fast Post‐SCF Local‐Hybrid Scheme for Highly Accurate Energy Differences of Large Main‐Group Systems

Journal of Computational Chemistry, Volume 47, Issue 17, 30 June 2026.
A post‐SCF energy‐corrected local‐hybrid scheme, EC(LH)@(m)GGA, is introduced, in which hyper‐meta‐GGA ingredients obtained from inexpensive meta‐GGA or GGA orbitals are used as input for a single local‐hybrid energy evaluation. Using LH25nP as a prototype, this strategy retains the characteristic accuracy and strong‐correlation improvement of the ...
Artur Wodyński, Martin Kaupp
wiley   +1 more source

Determination of floral organ identity by Arabidopsis MADS domain homeotic proteins AP1, AP3, PI, and AG is independent of their DNA-binding specificity [PDF]

, 1997
The MADS domain homeotic proteins APETALA1 (AP1), APETALA3 (AP3), PISTILLATA (PI), and AGAMOUS (AG) combinatorially specify the identity of Arabidopsis floral organs. AP1/AP1, AG/AG, and AP3/PI dimers bind to similar CArG box sequences; thus, differences
Riechmann, José Luis, Meyerowitz, Elliot M.   +1 more
core  

Unraveling the Molecular Mechanisms of Glioma Recurrence: A Study Integrating Single‐Cell and Spatial Transcriptomics

Annals of Clinical and Translational Neurology, Volume 13, Issue 6, Page 1160-1178, June 2026.
ABSTRACT Objective Glioma recurrence severely impacts patient prognosis, with current treatments showing limited efficacy. Traditional methods struggle to analyze recurrence mechanisms due to challenges in assessing tumor heterogeneity, spatial dynamics, and gene networks.
Lei Qiu, Yinjiao Fei, Jiaxuan Ding, Kexin Shi, Jinyan Luo, Yuchen Zhu, Xingjian Sun, Gefei Jiang, Yuandong Cao, Weilin Xu, Shu Zhou   +10 more
wiley   +1 more source

Genomic Architecture of AP2/ERF Superfamily Genes in Marigold (Tagetes erecta) and Insights into the Differential Expression Patterns of AP2 Family Genes During Floral Organ Specification

Agronomy
The APETALA2/Ethylene-Responsive Factor (AP2/ERF) superfamily is one of the largest transcription factor families in plants, playing diverse roles in development, stress response, and metabolic regulation. Despite their ecological and economic importance,
Hang Li, Guoqing Chen, Shirui Hu, Cuicui Liu, Manzhu Bao, Yanhong He   +5 more
doaj   +1 more source

Binding site selection for the plant MADS domain protein AGL15: an in vitro and in vivo study.

The Journal of biological chemistry, 2003
AGL15 (for AGAMOUS-like 15) is currently the only reported member of the plant MADS domain family of transcriptional regulators that preferentially accumulates during embryo development. Additionally, AGL15 is one of the more divergent members of the MADS domain family, including within the DNA-binding domain.
Weining, Tang, Sharyn E, Perry
openaire   +1 more source

Additional file 17: of Comparative analysis of binding patterns of MADS-domain proteins in Arabidopsis thaliana

, 2018
Figure S9. Conservation of CArG-boxes in ChIP-seq peaks among Arabidopsis thaliana ecotypes. (A) For each position in each occurrence of a CArG-box, color indicates entropy as a measure for conservation of that position among the ecotypes. Legend indicates logarithmic scale used for entropy values, between 0.0 (perfect conservation) and the maximum ...
Aerts, Niels, de Bruijn, Suzanne, van Mourik, Hilda, Angenent, Gerco, van Dijk, Aalt   +4 more
openaire   +1 more source

Organ‐Specific and Conserved Regulatory Logic Orchestrates Gene Expression in the Embryonic Mesothelium

Advanced Science, Volume 13, Issue 34, 19 June 2026.
Integrated multi‐omic profiling maps the gene‐regulatory landscape of the coelomic mesothelium across heart, lung, and pancreas. A cardiac‐restricted regulatory program is uncovered in which TBX20 activates heart mesothelial (epicardial) cis‐regulatory elements, while MAF emerges as a conserved regulator of mesothelial identity.
Quang Minh Dang, Nicola Smart, Andia Nicole Redpath, Joaquim Miguel Vieira   +3 more
wiley   +1 more source

Additional file 1: of Comparative analysis of binding patterns of MADS-domain proteins in Arabidopsis thaliana

, 2018
Table S1. Percentage of peak centers of which at least half the peak center falls within the promoter. (PDF 45 kb)
Aerts, Niels, de Bruijn, Suzanne, van Mourik, Hilda, Angenent, Gerco, van Dijk, Aalt   +4 more
openaire   +1 more source

Discovery of an Adaptive Neuroimmune Response Driving Itch and Fast Tick Removal with Implications for Preventing Pathogen Transmission

Advanced Science, Volume 13, Issue 32, 9 June 2026.
Itch‐induced tick removal (IITR): An acquired neuroimmune mechanism, itch‐induced tick removal, develops after repeated tick exposure, mobilizing T cells and macrophages at the tick bite site to trigger a rapid scratching response that facilitates timely tick removal within a critical window that precedes the transmission of many tick‐borne pathogens ...
Johannes S. P. Doehl, Tiago D. Serafim, Serena Doh, Charles S. Grugan, Eva Iniguez, Luana Rogerio, Ronja Frigard, Ranadhir Dey, Pedro Cecilio, Xinglong Gu, Pang‐Yen Tseng, Aline da Silva Moreira, Mahnaz Minai, James Oristian, Hans Ackerman, Steven Brooks, Caroline Percopo, Siu‐Ping Ng, Derron A. Alves, Lucas Tirloni, Jennifer M. Anderson, Adriana Marques, Fabiano Oliveira, Shaden Kamhawi, Daniel E. Sonenshine, José M. C. Ribeiro, Mark Hoon, Jesus G. Valenzuela   +27 more
wiley   +1 more source

Additional file 14: of Comparative analysis of binding patterns of MADS-domain proteins in Arabidopsis thaliana

, 2018
Figure S8. Heatmap of occurences of extensions of individual perfect CArG boxes. For each MADS TF, color indicates the percentage occurence of specific subsequences (per line). Red, zero occurence; the more yellow/white, the higher the percentage. (PDF 70 kb)
Aerts, Niels, de Bruijn, Suzanne, van Mourik, Hilda, Angenent, Gerco, van Dijk, Aalt   +4 more
openaire   +1 more source