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Software Tools and Approaches for Compound Identification of LC-MS/MS Data in Metabolomics. [PDF]
The annotation of small molecules remains a major challenge in untargeted mass spectrometry-based metabolomics. We here critically discuss structured elucidation approaches and software that are designed to help during the annotation of unknown compounds.
Blaženović, Ivana+3 more
core +4 more sources
MetaboLights: open data repository for metabolomics
MetaboLights is a global database for metabolomics studies including the raw experimental data and the associated metadata. The database is cross-species and cross-technique and covers metabolite structures and their reference spectra as well as their ...
Ozgur Yurekten+6 more
semanticscholar +1 more source
The metabolic consequences of HIV/TB co-infection
Background The synergy between the human immunodeficiency virus (HIV) and Mycobacterium tuberculosis during co-infection of a host is well known. While this synergy is known to be driven by immunological deterioration, the metabolic mechanisms that ...
Chandré Herbert+3 more
doaj +1 more source
HIV-1 Tat amino acid residues that influence Tat-TAR binding affinity: a scoping review
HIV-1 remains a global health concern and to date, nearly 38 million people are living with HIV. The complexity of HIV-1 pathogenesis and its subsequent prevalence is influenced by several factors including the HIV-1 subtype.
Piwai Terry Gotora+2 more
doaj +1 more source
Optimising a urinary extraction method for non-targeted GC–MS metabolomics
Urine is ideal for non-targeted metabolomics, providing valuable insights into normal and pathological cellular processes. Optimal extraction is critical since non-targeted metabolomics aims to analyse various compound classes.
Cara Olivier, Bianca Allen, Laneke Luies
doaj +1 more source
Metabolomics in cancer research and emerging applications in clinical oncology
Cancer has myriad effects on metabolism that include both rewiring of intracellular metabolism to enable cancer cells to proliferate inappropriately and adapt to the tumor microenvironment, and changes in normal tissue metabolism.
D. R. Schmidt+5 more
semanticscholar +1 more source
Transcriptionally imprinted glycomic signatures of acute myeloid leukemia
Background Acute myeloid leukemia (AML) is a genetically and phenotypically heterogeneous disease that has been suffering from stagnant survival curves for decades.
Constantin Blöchl+4 more
doaj +1 more source
Toward a Standardized Strategy of Clinical Metabolomics for the Advancement of Precision Medicine [PDF]
Despite the tremendous success, pitfalls have been observed in every step of a clinical metabolomics workflow, which impedes the internal validity of the study.
Kang, Yun Pyo+6 more
core +1 more source
The highly adaptive cellular response of Mycobacterium tuberculosis to various antibiotics and the high costs for clinical trials, hampers the development of novel antimicrobial agents with improved efficacy and safety.
Kirsten E. Knoll+2 more
doaj +1 more source