Results 81 to 90 of about 138,246 (299)

Diversity of endophytic bacteria of Dendrobium officinale based on culture-dependent and culture-independent methods

Biotechnology & Biotechnological Equipment, 2017
Culture-dependent and culture-independent methods were compared and evaluated in the study of the endophytic diversity of Dendrobium officinale. Culture-independent methods consisted of polymerase chain reaction–denaturing gradient gel electrophoresis ...
Cong Pei, Chunyi Mi, Lihua Sun, Wenhong Liu, Ou Li, Xiufang Hu   +5 more
doaj   +1 more source

Harnessing Large Language Models to Advance Microbiome Research: From Sequence Analysis to Clinical Applications

Advanced Intelligent Discovery, EarlyView.
Large language models are transforming microbiome research by enabling advanced sequence profiling, functional prediction, and association mining across complex datasets. They automate microbial classification and disease‐state recognition, improving cross‐study integration and clinical diagnostics.
Jieqi Xing, He Wang, Yangyang Sun, Xiaoquan Su, Shunyao Wu   +4 more
wiley   +1 more source

metagenome-atlas/atlas: Functional annotation with eggNOG mapper V2

, 2019
ATLAS - Three commands to start analysing your metagenome ...
Silas Kieser, Jackson M. Tsuji, Richard Allen White III, Joe Brown, Sean M. Colby, Mattias de Hollander, Chris Overall, Colin Brislawn   +7 more
core   +1 more source

Water Metagenome Databases.zip

, 2023
Unpublished metagenome ...
Cunmin Wang (14568482)
core   +1 more source

Parameters for metagenome analysis.

, 2021
Parameters for metagenome analysis.
Michihiro Araki (61338), Kou Ikejima (11890324), Katsuji Morioka (11890321), Yuki Kuriya (11890318), Masahiro Murata (8501400), Mika Nomura (682966), Hideki Sawada (2550499), Tomoaki Ichie (2929254), Kohsuke Adachi (2076934), Prasert Tongununui (11890315)   +9 more
core   +1 more source

Co‐Infection of Brucella canis and Brucella melitensis in a Domestic Dog With Zoonotic Transmission to Human, China

Animal Research and One Health, EarlyView.
Source attribution figure for human and dogs Brucella canis infections. ABSTRACT We report a rare occurrence of genetic material from both Brucella canis and B. melitensis detected in a domesticated dog from Jiangsu Province, China. The detection was confirmed through serological assays, quantitative PCR (qPCR), metagenomic and genomic sequencing ...
Shengxin Ge, Jian Xu, Qingchun Shen, Jiabo Ding, Xiaowen Yang   +4 more
wiley   +1 more source

Metagenome-assembled genome (MAG) information from Nome Creek, Alaska soils

, 2019
Information on 54 prokaryotic metagenome-assembled genome (MAG) sequences binned from a co-assembly of 12 soil samples from this wildfire impacted upland Alaskan boreal forest soils.
Neslihan Tas (6191723)
core   +1 more source

Metagenome Illumina Index

, 2022
 Data relating to the thesis:  Constraining Microbial Community Composition, Structure, and Function Within Acidic Geothermal Springs on São Miguel Island  This is the index used for the Metagenome data described in this thesis. This index will need to
Vincent Rennie (13875422)
core   +1 more source

A Metagenome‐Assembled Genome Catalog From the Global Ruminant Microbiomes

Animal Research and One Health, EarlyView.
The Ruminant Gastrointestinal MAG Catalog (RGMC) is a comprehensive global resource offering 40,812 strain‐level genomes across 53 bacterial and 4 archaeal classes. It greatly surpasses prior efforts in scale and diversity, serving as an essential foundation for research in ruminant nutrition, microbial function, and methane mitigation.
Shizhe Zhang, Qiushuang Li, Bingzi Ouyang, Wenxing Wang, Xiang Zhou, Xiumin Zhang, Rong Wang, Zhiliang Tan, Min Wang   +8 more
wiley   +1 more source

Continental scale metagenomics reveals Microcystis‐induced synchrony among aquatic taxa is exacerbated by trophic cascades

Ecography, EarlyView.
Harmful Microcystis proliferation severely threatens aquatic ecosystems globally, but its impacts on food‐web stability remain poorly understood. Here, we analyzed 1309 metagenomic samples from freshwater ecosystems across China to investigate how Microcystis abundance affects synchrony among taxa in multi‐trophic food webs (from bacteriophages to ...
Lemian Liu, Siqi Zhu, Xiaoqin Huang, Wenjia Hu, Lixiang Luo, Xiusong Pan, Jianfeng Chen   +6 more
wiley   +1 more source