Results 51 to 60 of about 7,727 (208)
Bacterial metatranscriptome of dentin caries [PDF]
Journal of Oral Microbiology, 2017 Dental caries results from altered microbial community activity in disease compared to health. Caries advanced into dentin was compared with coronal caries and caries-free sites. Oral bacterial samples were obtained from young children, placed in RNAlater and stored frozen. mRNA was purified and sequenced on an Illumina NextSeq 500 platform.
Anne CR Tanner +7 more
openaire +2 more sources
Spatial metatranscriptomics resolves host–bacteria–fungi interactomes
Nature Biotechnology, 2023 AbstractThe interactions of microorganisms among themselves and with their multicellular host take place at the microscale, forming complex networks and spatial patterns. Existing technology does not allow the simultaneous investigation of spatial interactions between a host and the multitude of its colonizing microorganisms, which limits our ...
Sami Saarenpää +6 more
openaire +2 more sources
Targeted metatranscriptomics of compost derived consortia reveals a GH11 exerting an unusual exo-1,4-β-xylanase activity [PDF]
, 2017 Background: Using globally abundant crop residues as a carbon source for energy generation and renewable chemicals production stands out as a promising solution to reduce current dependency on fossil fuels.
A Bacic +98 more
core +1 more source
Frontiers in Microbiology, 2017 Chinese liquor is one of the world's best-known distilled spirits and is the largest spirit category by sales. The unique and traditional solid-state fermentation technology used to produce Chinese liquor has been in continuous use for several thousand ...
Yuhong Huang +19 more
doaj +1 more source
Controlling taxa abundance improves metatranscriptomics differential analysis
BMC Microbiology, 2022 Abstract Background A common task in analyzing metatranscriptomics data is to identify microbial metabolic pathways with differential RNA abundances across multiple sample groups. With information from paired metagenomics data, some differential methods control for either DNA or taxa abundances
Zhicheng Ji, Li Ma
openaire +3 more sources
Colony formation in Phaeocystis antarctica : connecting molecular mechanisms with iron biogeochemistry [PDF]
, 2018 © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Biogeosciences 15 (2018): 4923-4942, doi:10.5194/bg-15-4923-2018.Phaeocystis antarctica is an ...
Allen, Andrew E. +8 more
core +1 more source
Coupled RNA-SIP and metatranscriptomics of active chemolithoautotrophic communities at a deep-sea hydrothermal vent [PDF]
, 2016 © The International Society for Microbial Ecology, 2016. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in ISME Journal 10 (2016): 1925–1938, doi:10.1038/ismej.2015.258.The ...
Fortunato, Caroline S., Huber, Julie A.
core +4 more sources
Advancing periodontitis microbiome research: integrating design, analysis, and technology
Frontiers in Cellular and Infection MicrobiologyPeriodontitis, a chronic inflammatory disease affecting 20%-50% of adults worldwide, is driven by polymicrobial synergy and dysbiosis. Despite numerous studies on the oral microbiota in periodontitis, significant heterogeneity exists between findings ...
Yibing Han, Pei-Hui Ding
doaj +1 more source
Frontiers in Microbiology, 2015 Compared to our understanding of the taxonomic composition of the symbiotic microbes in marine sponges, the functional diversity of these symbionts is largely unknown.
Cara L Fiore +3 more
doaj +1 more source
Metatranscriptomics reveals temperature-driven functional changes in microbiome impacting cheese maturation rate [PDF]
, 2016 © The Author(s), 2016. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Scientific Reports 6 (2016): 21871, doi:10.1038/srep21871.Traditional cheeses harbour complex ...
De Filippis, Francesca +4 more
core +3 more sources