MICdb3.0: a comprehensive resource of microsatellite repeats from prokaryotic genomes. [PDF]
The MICdb is a comprehensive relational database of perfect microsatellites extracted from completely sequenced and annotated genomes of bacteria and archaea. The current version MICdb3.0 is an updated and revised version of MICdb2.0. As compared with the previous version MICdb2.0, the current release is significantly improved in terms of much larger ...
Mudunuri SB, Patnana S, Nagarajaram HA.
europepmc +5 more sources
Measuring microsatellite conservation in mammalian evolution with a phylogenetic birth-death model. [PDF]
Microsatellites make up ∼3% of the human genome, and there is increasing evidence that some microsatellites can have important functions and can be conserved by selection.
Buschiazzo, Emmanuel+4 more
core +1 more source
RNA Helicases in Microsatellite Repeat Expansion Disorders and Neurodegeneration
Short repeated sequences of 3−6 nucleotides are causing a growing number of over 50 microsatellite expansion disorders, which mainly present with neurodegenerative features. Although considered rare diseases in relation to the relatively low number of cases, these primarily adult-onset conditions, often debilitating and fatal in absence of a cure ...
Lydia M. Castelli+6 more
openaire +3 more sources
Prognosis prediction of stage IV colorectal cancer patients by mRNA transcriptional profile
This study aimed to clarify the prognostic factors for stage IV CRC patients undergoing primary cancer resection but not liver metastasis resection. WES and RNA‐Seq were used to sequence primary cancer tissues of 78 and 84 patients, respectively. Models were established to stratify the prognosis and to predict individual patient prognosis.
Bian Wu+5 more
wiley +1 more source
Phase 1b study of anlotinib combined with TQB2450 in pretreated advanced biliary tract cancer and biomarker analysis. Abstract Background and Aims We evaluated the efficacy and safety of the antiangiogenic tyrosine kinase inhibitor anlotinib plus TQB2450, a programmed death‐ligand 1 inhibitor in pretreated advanced biliary tract cancers (BTCs ...
Jun Zhou+13 more
wiley +1 more source
The accuracy, feasibility and challenges of sequencing short tandem repeats using next-generation sequencing platforms. [PDF]
To date we have little knowledge of how accurate next-generation sequencing (NGS) technologies are in sequencing repetitive sequences beyond known limitations to accurately sequence homopolymers.
Monika Zavodna+3 more
doaj +1 more source
The Statistical Similarity of Repeating and Non-Repeating Fast Radio Bursts [PDF]
In this paper, we present a sample of 21 repeating fast radio bursts (FRBs) detected by different radio instruments before September 2021. Using the Anderson--Darling test, we compared the distributions of extra-Galactic dispersion measure ($DM_{\rm E}$) of non-repeating FRBs, repeating FRBs and all FRBs.
arxiv +1 more source
De novo Development and Characterization of Tetranucleotide Microsatellite Loci Markers from a Southeastern Population of the House Finch (Haemorhous mexicanus) [PDF]
Microsatellites are short tandem repeats (e.g. TAGATAGA) of base pairs in a species’ genome. High mutation rates in these regions produce variation in the number of repeats across individuals that can be utilized to study patterns of population- and ...
Barron, Douglas G+2 more
core +3 more sources
Siberian wild rye (Elymus sibiricus L.), an allotetraploid species, is a potentially high-quality perennial forage crop native to temperate regions. We used fluorescently conjugated oligonucleotides, representing ten repetitive sequences, including 6 ...
Jihong Xie+4 more
doaj +1 more source
GECAM Localization of High Energy Transients and the Systematic Error [PDF]
Gravitational wave high-energy Electromagnetic Counterpart All-sky Monitor (GECAM) is a pair of microsatellites (i.e. GECAM-A and GECAM-B) dedicated to monitoring gamma-ray transients including gravitational waves high-energy electromagnetic counterparts, Gamma-ray Bursts, Soft Gamma-ray Repeaters, Solar Flares and Terrestrial Gamma-ray Flashes.
arxiv +1 more source