Results 21 to 30 of about 28,249 (264)

Analyses of carnivore microsatellites and their intimate association with tRNA-derived SINEs

BMC Genomics, 2006
Background The popularity of microsatellites has greatly increased in the last decade on account of their many applications. However, little is currently understood about the factors that influence their genesis and distribution among and within species ...
Bosch Montserrat, Domingo-Roura Xavier, Andrés Olga, López-Giráldez Francesc   +3 more
doaj   +1 more source

Characterization of Alu Repeats That Are Associated with Trinucleotide and Tetranucleotide Repeat Microsatellites [PDF]

Genome Research, 1997
The association of subclasses of Alu repetitive elements with various classes of trinucleotide and tetranucleotide microsatellites was characterized as a first step toward advancing our understanding of the evolution of microsatellite repeats. In addition, information regarding the association of specific classes of microsatellites with families of Alu
C N, Yandava, J M, Gastier, J C, Pulido, T, Brody, V, Sheffield, J, Murray, K, Buetow, G M, Duyk   +7 more
openaire   +2 more sources

The accuracy, feasibility and challenges of sequencing short tandem repeats using next-generation sequencing platforms. [PDF]

PLoS ONE, 2014
To date we have little knowledge of how accurate next-generation sequencing (NGS) technologies are in sequencing repetitive sequences beyond known limitations to accurately sequence homopolymers.
Monika Zavodna, Andrew Bagshaw, Rudiger Brauning, Neil J Gemmell   +3 more
doaj   +1 more source

Frameshift mutations at coding mononucleotide repeat microsatellites in endometrial carcinoma with microsatellite instability [PDF]

Cancer, 2000
Microsatellite instability (MI) is a frequent occurrence in endometrioid carcinoma of the endometrium (EC). Several genes known to contain mononucleotide short tracts in their coding sequences (TGF-beta RII, IGFIIR, BAX, hMSH6, and hMSH3) are likely targets for mutations in these tumors.DNA from 24 patients with EC and MI was extracted from blood and ...
Lluis Catasus, Xavier Matias Guiu, Pilar Machin, Gian Franco Zannoni, Giovanni Scambia, BENEDETTI PANICI, PIERLUIGI, Jaime Prat   +6 more
openaire   +3 more sources

Molecular karyotyping of Siberian wild rye (Elymus sibiricus L.) with oligonucleotide fluorescence in situ hybridization (FISH) probes.

PLoS ONE, 2020
Siberian wild rye (Elymus sibiricus L.), an allotetraploid species, is a potentially high-quality perennial forage crop native to temperate regions. We used fluorescently conjugated oligonucleotides, representing ten repetitive sequences, including 6 ...
Jihong Xie, Yan Zhao, Linqing Yu, Ruijuan Liu, Quanwen Dou   +4 more
doaj   +1 more source

Rapid isolation of DNA sequences flanking microsatellite repeats

Nucleic Acids Research, 1994
Fiona Francis, P S Rowe
exaly   +4 more sources

Clinical and mechanism research progress on short tandem repeat ⁃ related neuromuscular diseases

Chinese Journal of Contemporary Neurology and Neurosurgery, 2023
Short tandem repeat (STR) is a component of the human genome, the number of repeats of STR is prone to change during DNA replication, and when it exceeds a certain threshold, it will lead to the occurrence of diseases, most of which involve the nervous ...
WAN Ya‑lan, YU Jia‑xi, DENG Jian‑wen, HONG Dao‑jun, WANG Zhao‑xia   +4 more
doaj   +1 more source

European guidelines from the EHTG and ESCP for Lynch syndrome: an updated third edition of the Mallorca guidelines based on gene and gender

BJS (British Journal of Surgery), EarlyView., 2020
Recommendations for clinical and molecular identification of LS, surgical and endoscopic management of LS‐associated colorectal cancer and preventive measures for cancer were produced. The emphasis was on surgical and gastroenterological aspects of the cancer spectrum.
T. T. Seppälä, A. Latchford, I. Negoi, A. Sampaio Soares, R. Jimenez‐Rodriguez, L. Sánchez‐Guillén, D. G. Evans, N. Ryan, E. J. Crosbie, M. Dominguez‐Valentin, J. Burn, M. Kloor, M. von Knebel Doeberitz, F. J. B. van Duijnhoven, P. Quirke, J. R. Sampson, P. Møller, G. Möslein, on behalf of the European Hereditary Tumour Group (EHTG) and European Society of Coloproctology (ESCP)   +18 more
wiley   +1 more source

Rapid development of gene-tagged microsatellite markers from bacterial artificial chromosome clones using anchored TAA repeat primers

BioTechniques, 2003
We developed a technique to improve the efficiency of producing TAA repeat microsatellite markers linked to interspecific conserved genes. Template DNA was prepared from cultures derived from single bacterial artificial chromosome (BAC) colonies using a ...
Geoffrey C. Waldbieser, Sylvie M.A. Quiniou, Attila Karsi   +2 more
doaj   +1 more source

Microsatellite development from genome skimming and transcriptome sequencing: comparison of strategies and lessons from frog species

BMC Genomics, 2018
Background Even though microsatellite loci frequently have been isolated using recently developed next-generation sequencing (NGS) techniques, this task is still difficult because of the subsequent polymorphism screening requires a substantial amount of ...
Yun Xia, Wei Luo, Siqi Yuan, Yuchi Zheng, Xiaomao Zeng   +4 more
doaj   +1 more source