SMRT Sequencing Revealed Mitogenome Characteristics and Mitogenome-Wide DNA Modification Pattern in Ophiocordyceps sinensis [PDF]
Frontiers in Microbiology, 2017 Single molecule, real-time (SMRT) sequencing was used to characterize mitochondrial (mt) genome of Ophiocordyceps sinensis and to analyze the mt genome-wide pattern of epigenetic DNA modification. The complete mt genome of O. sinensis, with a size of 157,539 bp, is the fourth largest Ascomycota mt genome sequenced to date.
Xincong Kang +11 more
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PeerJ, 2022 Background The genus Calidris (Charadriiformes, Scolopacidae) includes shorebirds known as dunlin, knots, and sanderlings. The relationships between species nested within Calidris, including Eurynorynchus, Limicola and Aphriza, are not well-resolved. Methods Samples were collected from Xiaoyangkou, Rudong County, Jiangsu Province, China. Mitogenomes
Wan Chen +8 more
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The complete mitochondrial genome of the common dentex, Dentex dentex (perciformes: Sparidae)
Mitochondrial DNA. Part B. Resources, 2018 The common Dentex (Dentex dentex, Linnaeus 1758) has a significant economic importance and is a highly valued table fish in the Mediterranean region. The paucity of genetic information relating to sparids, despite their growing economic value, provides ...
Marina Ceruso +5 more
doaj +1 more source
Mitochondrial metagenomics: letting the genes out of the bottle [PDF]
, 2016 ‘Mitochondrial metagenomics’ (MMG) is a methodology for shotgun sequencing of total DNA from specimen mixtures and subsequent bioinformatic extraction of mitochondrial sequences.
Crampton-Platt, Alex +3 more
core +1 more source
Beetles, barcodes and big data: A deep dive into the phylogeny of Harpalinae (Carabidae)
Systematic Entomology, Volume 51, Issue 2, April‐June 2026.The largest phylogenetic study of the Carabidae to date is provided with a focus on the Harpalinae. Using novel mitogenomes with a site‐based approach combined with data mining from GenBank and BOLD, we achieve dense coverage of the major Harpalinae sensu lato clades.
Beulah H. Garner +2 more
wiley +1 more source
Corrigendum: Comparative analysis of the complete mitochondrial genomes of three Zeugodacus species (Insecta: Tephritidae: Dacinae) and their phylogenetic relationships with other congeners. Arthropod Systematics & Phylogeny 81: 747–759. doi: 10.3897/asp.81.e105025 [PDF]
Arthropod Systematics & PhylogenyThe complete mitogenomes of fruit flies Zeugodacus (Javadacus) calumniatus, Z. (Javadacus) heinrichi and Z. (Sinodacus) hochii have similar gene order and contain 37 genes and a non-coding region.
Hoi-Sen Yong +7 more
doaj +3 more sources
Grass fly evolution unlocked: Phylogenomics and classification of worldwide Chloropidae (Diptera)
Systematic Entomology, Volume 51, Issue 2, April‐June 2026.Phylogenomics resolves deep relationships in Chloropidae. New framework for global Chloropidae classification. Novel morphological synapomorphy for grass flies. Abstract Chloropidae, commonly known as grass flies, is a hyper‐diverse family of true flies thriving in terrestrial ecosystems around the world with importance to conservation and economy ...
Paula R. Riccardi +3 more
wiley +1 more source
Statistical Evaluation of Monophyly in the ‘Broad-Nosed Weevils’ through Molecular Phylogenetic Analysis Combining Mitochondrial Genome and Single-Locus Sequences (Curculionidae: Entiminae, Cyclominae, and Hyperinae) [PDF]
, 2018 Establishing well-supported monophyletic groups is a key requirement for producing a natural classification that reflects evolutionary descent. In a phylogenetic framework this is best achieved through dense taxon sampling and the analysis of a robust ...
Alfried Vogler +10 more
core +3 more sources
Systematic Entomology, Volume 51, Issue 2, April‐June 2026.Mitogenomes from 166 Eurytomidae confirm Eurytoma is polyphyletic; 10 species groups are recovered in Eurytoma s.s., and several lineages are reassigned to other genera or newly delimited clades. Conservative head and mesosoma traits, especially the postgenal depression and ventral shelf, track mitogenomic clades closely, supporting their diagnostic ...
Duk‐Young Park +2 more
wiley +1 more source
The mitogenome phylogeny of Adephaga (Coleoptera)
Molecular Phylogenetics and Evolution, 2017 The beetle suborder Adephaga consists of several aquatic ('Hydradephaga') and terrestrial ('Geadephaga') families whose relationships remain poorly known. In particular, the position of Cicindelidae (tiger beetles) appears problematic, as recent studies have found them either within the Hydradephaga based on mitogenomes, or together with several ...
Lopez-Lopez, A, Vogler, AP
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