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Evaluation of Brucella MLVA typing for human brucellosis

Journal of Microbiological Methods, 2007
Human brucellosis is still the most common bacterial zoonosis worldwide. Neither well-known molecular tools nor the classical biotyping methods are satisfactory for subtyping of Brucella spp. Loci containing Variable Number of Tandem Repeats (VNTRs) have recently proved their usefulness in typing strains from animal origin despite the high genetic ...
Herbert Tomaso   +2 more
exaly   +3 more sources

Optimization of MLVA loci combination using metaheuristic methods

Journal of Intelligent & Fuzzy Systems, 2023
Multilocus variable number tandem repeat analysis (MLVA) utilizes short DNA repeat polymorphism in genomes, which is termed variable number tandem repeat (VNTR), to differentiate closely related organisms. One research challenge is to find an optimal set of VNTR to distinguish different members accurately.
Grace Yee Lin Ng   +4 more
openaire   +2 more sources

Impact of IS1111 insertion on the MLVA genotyping of Coxiella burnetii

Microbes and Infection, 2015
Q fever epidemiological investigations of the likely sources of contamination may involve Coxiella burnetii MLVA for direct and rapid typing from clinical samples. However, little information is available with regards to PCR amplification failures in C. burnetii MLVA typing.
Elise Yang   +2 more
exaly   +5 more sources

A software tool for the selection of Tandem Repeats for MLVA analysis

2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2013
DNA fingerprinting is a reliable tool for identifying, tracing and characterizing bacterial clonal population structure. A recent technique is given by the Multiple Loci VNTR Analysis (MLVA), where VNTR denotes Variable Number of Tandem Repeats, that meets the need for fast and reliable typing methods by combining the polymorphic nature of tandem ...
Giuseppe D'Avenio   +2 more
openaire   +2 more sources

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