Results 11 to 20 of about 5,099,016 (263)
Representing and analysing molecular and cellular function in the computer [PDF]
, 2000 Determining the biological function of a myriad of genes, and understanding how they interact to yield a living cell, is the major challenge of the post genome-sequencing era.Wodak, SJ, Naim, A, Wernisch, L, Eldridge, M, Gilbert, D, Mancuso, R, Helden, JV +6 morecore +8 more sourcesThe Rice Annotation Project Database (RAP-DB): 2008 update [PDF]
, 2008 The Rice Annotation Project Database (RAP-DB) was created to provide the genome sequence assembly of the International Rice Genome Sequencing Project (IRGSP), manually curated annotation of the sequence, and other genomics information that could be ...Raghuvanshi S, Hosokawa, S., SMITH-WHITE, B, Zhao, Q., An, G., Tateno, Y., Imanishi, T., Nobushima, S., SUZUKI, M, NOBUTA, K, Oota, S., Tatusova T, Nakaoka, H., Lu, C., Shinso Y, Takeda, J.-i., Todokoro F, Yamamoto, N., Khurana, J.P., OOta S, Tanaka, T., Kim, H., Sakai, Y., Piegu B, Ito, Y., Hosokawa S, Bruskiewich, R. M., Kubooka H, Harada, E., Messing, J., Lin, Yao-Cheng, HAN, B, Meyers BC, Wei, F-J, Koyanagi, K. O., Sakai, H., Ikeo K, Ohyanagi, H., IKAWA, H, Meyers, B.C., Barrero, R.A., Aono R, Okido, T., Zuccolo, A., HARADA, E, KOYANAGI, KO, Green PJ, Sasaki T, Sato Y, Bureau TE, Nobuta, K., Barrero, R. A., Yamasaki C, Shibata, M., NUMA, H, Zhao Q, Christie, K.R., Lieberherr, D., Kanno M, Panaud O, Bureau, T.E., Souvorov A, MESSING, J, An, G., Messing J, KIM, H, Hsing, Y-i, PIEGU, B, Lonsdale, D., MEYERS, BC, Bin, H., Ito, Y., HABERER, G, Tanino M, BRUSKIEWICH, RM, Aono, R., Namiki, N., Green, P. J., Sanbonmatsu, R., SAKAI, Y, Fujisawa, M., Zuccolo, A., HABARA, T, Shinso, Y., Fujisawa, M., Ohyanagi, H., Yamasaki, C., HOEN, DR, Christie, K. R., Yamaguchi, K., Kramer, M. R., SHIBATA, M, Kubooka, H., Tada, M., Echeverria M., GREEN, PJ, Yamamoto, N., OOta, S., TANAKA, T, Hoen, D. R., Numa H, LONSDALE, D, An, S., Piegu, B., McCombie RW, Echeverria, M., SAKAI, H, Tateno Y, Habara, T., Ikawa, H., TYAGI, AK, Koyanagi, K.O., Itoh T, Gojobori, T., Harada, E., Raghuvanshi, S., Bureau, T. E., Hosokawa, S., Lin YC, Kramer MR, ANTONIO, BA, Yamamoto, M., Apweiler R, Kubooka, H., TATUSOVA, T, Kawahara Y, Suzuki M, TAKEDA, JI, Lonsdale, D., Antonio BA, Sanbonmatsu, R., Shinso, Y., KHURANA, JP, IMANISHI, T, Kanno, M., Tatusova, T., Hsing YI, FUJISAWA, M, Haberer, G., Numa, H., Yamaguchi, K., Ikeo, K., Todokoro, F., Ikeo, K., Chaparro, C., Singh, N. K., ECHEVERRIA, M, Smith-White, B., Ohyanagi H, Nagamura, Y., Wei, F. J., Wing, R. A., Habara T, NAKAOKA, H, PANAUD, O, WEI, FJ, Fujii, Y., Fuks G, Namiki N, Kikuchi, S., KRAMER, MR, MATSUYA, A, KAWASHIMA, H, Tanino, M., Whitfield, E.J., Christie KR, Harada E, Okido T, Todokoro, F., Saichi N, Singh, N.K., Sasaki, T., Numa, H., Sakata K, NOBUSHIMA, S, MCCOMBIE, RW, Kawashima, H., Kawahara, Y., Zhao, Q., Haberer, G., Bruskiewich, R.M., NAMIKI, N, IKEO, K, Ikawa, H., Nobuta K, Nakaoka H, Piegu, B., Tanino, M., Tateno, Y., KUBOOKA, H, Tanaka, T., HSING, YI, Antonio, B. A., Kim, H-R, SATO, Y, An G, Saichi, N., Suzuki, M., CHRISTIE, KR, Fuks, G., Barrero RA, APWEILER, R, Sato, Y., Tyagi, A. K., ITO, Y, YAMASAKI, C, FUKS, G, AONO, R, YAMAMOTO, M, YAMAMOTO, N, TADA, M, O'Donovan, C. C., TODOKORO, F, Kim H, WU, J, ZUCCOLO, A, OKIDO, T, Shibata M, Matsuya, A., McCombie, R. W., Koyanagi KO, HOSOKAWA, S, Apweiler, R., Chaparro C, BARRERO, RA, Tanaka T, Nobuta, K., Fujii, Y., Tyagi AK, SANBONMATSU, R, SAKATA, K, An S, Echeverria, M., Sakai, H., Tatusova, T., Fujisawa M, Sakata, K., Kawashima H, Lin, Y. C., WING, RA, OOTA, S, Wu, J., Habara, T., Whitfield EJ, LU, C, An, S., Lin, Y-C, Wu, J., Hoen DR, O'DONOVAN, CC, Han B, SHINSO, Y, Smith White B, Whitfield, E. J., Okido, T., Green, P.J., TATENO, Y, KIKUCHI, S, Kawahara, Y., Apweiler, R., Wu J, Kramer, M.R., Kikuchi S, Matsumoto, T., Kawashima, H., Hoen, D.R., Ito Y, Nobushima S, ZHAO, Q, SASAKI, T, Souvorov, A., Tada, M., Sakai, Y., LIEBERHERR, D, Sanbonmatsu R, McCombie, R.W., Fujii Y, Matsuya, A., Fuks, G., Lieberherr, D., Lieberherr D, Antonio, B.A., Ikawa H, Sakata, K., Raghuvanshi, S., MATSUMOTO, T, SAICHI, N, Nobushima, S., Yamamoto N, Gojobori T, Sakai Y, Yamamoto M, Singh NK, Hsing, Y. I., Smith-White, B., Lu C, NAGAMURA, Y, Khurana, J. P., AN, S, Tada M, Souvorov, A., Shibata, M., O'Donovan CC, Sakai H, KANNO, M, Nagamura Y, FUJII, Y, KAWAHARA, Y, Kikuchi, S., AN, G, Sasaki, T., Meyers, B. C., YAMAGUCHI, K, Suzuki, M., Han, B., ZUCCOLO, ANDREA, CHAPARRO, C, Bruskiewich RM, Chaparro, C., Aono, R., SOUVOROV, A, Nakaoka, H., O’Donovan, C.C., OHYANAGI, H, Yamasaki, C., Imanishi T, Lonsdale D, TANINO, M, BUREAU, TE, Lu, C., Panaud, O., Yamaguchi K, Kanno, M., Wing, R.A., Sato, Y., Matsumoto T, ITOH, T, GOJOBORI, T, Panaud, O., Messing, J., Haberer G, Saichi, N., Matsuya A, Wing RA, Khurana JP, Tyagi, A.K., Namiki, N., Itoh, T., Itoh, T., Imanishi, T., SINGH, NK, Matsumoto, T., Nagamura, Y., Yamamoto, M., RAGHUVANSHI, S, Takeda, J. I., Wei FJ, Takeda J, WHITFIELD, EJ, Gojobori, T. +359 morecore +1 more sourceN-Terminal-oriented proteogenomics of the marine bacterium Roseobacter Denitrificans Och114 using N-Succinimidyloxycarbonylmethyl)tris(2,4,6-trimethoxyphenyl)phosphonium bromide (TMPP) labeling and diagonal chromatography. [PDF]
, 2014 Given the ease of whole genome sequencing with next-generation sequencers, structural and functional gene annotation is now purely based on automated prediction.Armengaud, J., Bland, C., Hartmann, E. M., Armengaud, Jean, Bland, Céline, Christie-Oleza, Joseph Alexander, Fernandez, Bernard, Hartmann, Erica M. +7 morecore +1 more sourceGenDB - an open source genome annotation system for prokaryote genomes [PDF]
, 2003 Meyer F, Goesmann A, McHardy AC, et al. GenDB - an open source genome annotation system for prokaryote genomes. Nucleic Acids Research.Rupp, Oliver, Bartels, Daniela, Linke, Burkhard, McHardy, Alice C., Goesmann, Alexander ; https://orcid.org/, Bekel, Thomas, Kalinowski, Jörn, Giegerich, Robert, Pühler, Alfred ; https://orcid.org/, Meyer, Folker, Clausen, Jörn +10 morecore +1 more sourceGenome reannotation of the lizard Anolis carolinensis based on 14 adult and embryonic deep transcriptomes
BMC Genomics, 2013 Background The green anole lizard, Anolis carolinensis, is a key species for both laboratory and field-based studies of evolutionary genetics, development, neurobiology, physiology, behavior, and ecology. As the first non-avian reptilian genome sequenced,Eckalbar Walter L, Hutchins Elizabeth D, Markov Glenn J, Allen April N, Corneveaux Jason J, Lindblad-Toh Kerstin, Di Palma Federica, Alföldi Jessica, Huentelman Matthew J, Kusumi Kenro +9 moredoaj +1 more sourceImproved annotation of 3' untranslated regions and complex loci by combination of strand-specific direct RNA sequencing, RNA-seq and ESTs [PDF]
, 2014 The reference annotations made for a genome sequence provide the framework for all subsequent analyses of the genome. Correct and complete annotation in addition to the underlying genomic sequence is particularly important when interpreting the results ...Junfang Song, Geoffrey J Barton, Schurch Nicholas J., Brown, Sara J., Gordon G Simpson, Nicholas J Schurch, McLean, W. H. Irwin, Song Junfang, Simpson Gordon G., Sherstnev, Alexander, Brown Sara J., Alexander Sherstnev, Song, Junfang, McLean W. H. Irwin, Duc, Celine, Kate G Storey, Storey, Kate G., Schurch, Nicholas J., Cole Christian, Sherstnev Alexander, Simpson, Gordon G., Céline Duc, W H Irwin McLean, Cole, Christian; id_orcid, Christian Cole, Barton Geoffrey J., Sara J Brown, Duc Céline, Barton, Geoffrey J.; id_orcid, Storey Kate G. +29 morecore +1 more sourceComparison of three microarray probe annotation pipelines: differences in strategies and their effect on downstream analysis [PDF]
, 2009 BACKGROUND: Reliable annotation linking oligonucleotide probes to target genes is essential for functional biological analysis of microarray experiments.Groenen, M.A., Leunissen, J.A., Neerincx, P.B.T., Groenen, M.A.M., Pierrot Casel, Casel, P., Michael Watson, Neerincx, P.B., Christophe Klopp, Klopp, C., Pieter Neerincx, Dennis Prickett, Martien Groenen, Nie, H., Jack Leunissen, Haisheng Nie, Watson, M., Leunissen, J.A.M., Prickett, D. +18 morecore +1 more source
