Results 41 to 50 of about 1,795,685 (335)

ELM—the eukaryotic linear motif resource in 2020

open access: yesNucleic Acids Res., 2019
The eukaryotic linear motif (ELM) resource is a repository of manually curated experimentally validated short linear motifs (SLiMs). Since the initial release almost 20 years ago, ELM has become an indispensable resource for the molecular biology ...
Manjeet Kumar   +12 more
semanticscholar   +1 more source

Motif Clustering and Overlapping Clustering for Social Network Analysis

open access: yes, 2017
Motivated by applications in social network community analysis, we introduce a new clustering paradigm termed motif clustering. Unlike classical clustering, motif clustering aims to minimize the number of clustering errors associated with both edges and ...
Dau, Hoang   +3 more
core   +1 more source

Motifs

open access: yes, 2023
This dissertation explores the application of motif discovery in real-world time series, specifically focused on the impact of preprocessing steps on the detection of exact and approximate meaningful motifs (chapters 3 and 4). The results shed light on the discrepancy between commonly held assumptions about normalization and parameter settings and the ...
openaire   +3 more sources

Mosar: Efficiently Characterizing Both Frequent and Rare Motifs in Large Graphs

open access: yesApplied Sciences, 2022
Due to high computational costs, exploring motif statistics (such as motif frequencies) of a large graph can be challenging. This is useful for understanding complex networks such as social and biological networks. To address this challenge, many methods
Wenhua Guo   +4 more
doaj   +1 more source

Genome-Wide Identification of DNA Binding with One Finger (Dof) Gene Family in Tartary Buckwheat (Fagopyrum tataricum) and Analysis of Its Expression Pattern after Exogenous Hormone Stimulation

open access: yesBiology, 2022
DNA binding with one finger (Dof) proteins have been proven to be involved in multiple biological processes. However, genome-wide identification of the Dof gene family has not been reported for Tartary buckwheat (Fagopyrum tataricum).
Jing Li   +8 more
doaj   +1 more source

Functional Characteristics of Gene Expression Motifs with Single and Dual Strategies of Regulation

open access: yes, 2016
Transcriptional regulation by transcription factors and post-transcriptional regulation by microRNAs constitute two major modes of regulation of gene expression.
Bose, Indrani   +2 more
core   +1 more source

Motif counting beyond five nodes [PDF]

open access: yes, 2018
Counting graphlets is a well-studied problem in graph mining and social network analysis. Recently, several papers explored very simple and natural algorithms based on Monte Carlo sampling of Markov Chains (MC), and reported encouraging results. We show,
Bressan, Marco   +4 more
core   +1 more source

Gathering Existence as One of the Central Motifs in the Works of B. Pasternak and R.M. Rilke [PDF]

open access: yesStudia Litterarum
The article deals with the motivic paradigm of “collecting / packing existence” in the work of B. Pasternak. The study aims to determine its role in the lyrical and philosophical concept of the poet and to identify its structure and connection with the ...
Alla V. Radionova
doaj   +1 more source

The motif problem [PDF]

open access: yes, 2012
Fix a choice and ordering of four pairwise non-adjacent vertices of a parallelepiped, and call a motif a sequence of four points in R^3 that coincide with these vertices for some, possibly degenerate, parallelepiped whose edges are parallel to the axes ...
Canfield, E. Rodney   +3 more
core  

The C-terminal portion of the cleaved HT motif is necessary and sufficient to mediate export of proteins from the malaria parasite into its host cell [PDF]

open access: yes, 2012
The malaria parasite exports proteins across its plasma membrane and a surrounding parasitophorous vacuole membrane, into its host erythrocyte. Most exported proteins contain a Host Targeting motif (HT motif) that targets them for export. In the parasite
Cryar, Adam   +4 more
core   +1 more source

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