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OxBreaker: species-agnostic pipeline for the analysis of outbreaks using nanopore sequencing

open access: yes
Reding C   +13 more
europepmc   +1 more source

Three Decades of Nanopore Sequencing [PDF]

open access: yesNature Biotechnology, 2016
A long-held goal in sequencing has been to use a voltage-biased nanoscale pore in a membrane to measure the passage of a linear, single-stranded (ss) DNA or RNA molecule through that pore. With the development of enzyme-based methods that ratchet polynucleotides through the nanopore, nucleobase-by-nucleobase, measurements of changes in the current ...
Mark Akeson   +2 more
exaly   +3 more sources

Nanopore sequencing technology: nanopore preparations

Trends in Biotechnology, 2007
For the past decade, nanometer-scale pores have been developed as a powerful technique for sensing biological macromolecules. Various potential applications using these nanopores have been reported at the proof-of-principle stage, with the eventual aim of using them as an alternative to de novo DNA sequencing.
Minsoung, Rhee, Mark A, Burns
openaire   +2 more sources

Nanopore-Based Fourth-Generation DNA Sequencing Technology

open access: yesGenomics, Proteomics and Bioinformatics, 2015
Nanopore-based sequencers, as the fourth-generation DNA sequencing technology, have the potential to quickly and reliably sequence the entire human genome for less than $1000, and possibly for even less than $100.
Yanxiao Feng, Deqiang Wang, Cuifeng Ying
exaly   +2 more sources

Recent Advances in Nanopore Sequencing [PDF]

open access: yesElectrophoresis, 2012
The prospect of nanopores as a next‐generation sequencing platform has been a topic of growing interest and considerable government‐sponsored research for more than a decade. Oxford Nanopore Technologies recently announced the first commercial nanopore sequencing devices, to be made available by the end of 2012, while other companies (Life, Roche, and ...
Jungsuk Kim, William B. Dunbar
exaly   +3 more sources

Bioinformatics of nanopore sequencing

Journal of Human Genetics, 2019
Nanopore sequencing is one of the most exciting new technologies that undergo dynamic development. With its development, a growing number of analytical tools are becoming available for researchers. To help them better navigate this ever changing field, we discuss a range of software available to analyze sequences obtained using nanopore technology.
Wojciech Makałowski   +1 more
openaire   +2 more sources

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