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ViMOP: a user-friendly and field-applicable pipeline for untargeted viral genome nanopore sequencing. [PDF]
Petersen NP +14 more
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Exploiting nanopore sequencing advances for tRNA sequencing of human cancer models. [PDF]
Kochavi A +6 more
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Performance Evaluation of Targeted Nanopore Sequencing in Non-Tuberculous Mycobacteria Identification: A Comparative Study in Shenzhen, China. [PDF]
Gui J, Long C, Fu Y, He H, Li J, Wang F.
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Nanopore sequencing technology: nanopore preparations
Trends in Biotechnology, 2007For the past decade, nanometer-scale pores have been developed as a powerful technique for sensing biological macromolecules. Various potential applications using these nanopores have been reported at the proof-of-principle stage, with the eventual aim of using them as an alternative to de novo DNA sequencing.
Minsoung, Rhee, Mark A, Burns
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Bioinformatics of nanopore sequencing
Journal of Human Genetics, 2019Nanopore sequencing is one of the most exciting new technologies that undergo dynamic development. With its development, a growing number of analytical tools are becoming available for researchers. To help them better navigate this ever changing field, we discuss a range of software available to analyze sequences obtained using nanopore technology.
Wojciech Makałowski +1 more
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Recent advances in nanopore sequencing [PDF]
The prospect of nanopores as a next‐generation sequencing platform has been a topic of growing interest and considerable government‐sponsored research for more than a decade. Oxford Nanopore Technologies recently announced the first commercial nanopore sequencing devices, to be made available by the end of 2012, while other companies (Life, Roche, and ...
Raj D, Maitra +2 more
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Nanopore Sequencing for Mixed Samples
2023Long read Nanopore sequencing can be utilised to determine the quality and accuracy of genetically engineered changes in animals, which often produce heterogenous samples. The protocol presented in this chapter can be used for a range of both low and high throughput sequencing applications.
Angela H, Beckett, Samuel C, Robson
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Nanotechnology and Nanopore Sequencing
Recent Patents on Nanotechnology, 2017DNA sequencing is one of the crucially important tasks in the fields of genetics and cellular biology, which is benefiting from nanotechnology. DNA carries genetic information and sequencing it in a quick way helps researchers in achieving essential goals, including personalized medicine.
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The Current State of Nanopore Sequencing
2023Nanopore sensing is a disruptive, revolutionary way in which to sequence nucleic acids, including both native DNA and RNA molecules. First commercialized with the MinIONTM sequencer from Oxford Nanopore TechnologiesTM in 2015, this review article looks at the current state of nanopore sequencing as of June 2022.
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Nanopore RNA Sequencing Analysis
2021The recent advent of Nanopore sequencing allows for the sequencing of full-length RNA or cDNA molecules. This new type of data introduces new challenges from the computational point of view, and requires new software as well as dedicated analysis pipelines.
Tommaso, Leonardi, Adrien, Leger
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