Results 21 to 30 of about 80,761 (229)

Comparison of Analytical and Clinical Performance of HPV 9G DNA Chip, PANArray HPV Genotyping Chip, and Hybrid-Capture II Assay in Cervicovaginal Swabs [PDF]

Journal of Pathology and Translational Medicine, 2016
Background: Human papillomavirus (HPV) infection can be detected by using several molecular methods, including Hybrid-Capture II (HC2) assay and variable HPV DNA chip tests, although each method has different sensitivities and specificities.
Ho Young Jung, Hye Seung Han, Hyo Bin Kim, Seo Young Oh, Sun-Joo Lee, Wook Youn Kim   +5 more
doaj   +1 more source

A Brassica exon array for whole-transcript gene expression profiling [PDF]

, 2010
Affymetrix GeneChip® arrays are used widely to study transcriptional changes in response to developmental and environmental stimuli. GeneChip® arrays comprise multiple 25-mer oligonucleotide probes per gene and retain certain advantages over direct ...
King Graham J., Broadley, MR, May Sean T., John P. Hammond, Bowen, H. C., Bowen, HC, Hammond, J. P., Lochlainn, Seosamh O., Neil S Graham, Philip J White, Graham J. King, Broadley, Martin R., Ó Lochlainn Seosamh, May, ST, Hammond, John P., Graham, NS, Love Christopher G., Christopher G Love, Helen C. Bowen, Graham, N. S., Sean T. May, Philip J. White, Christopher G. Love, Graham, Neil S., O Lochlainn, S., Hammond John P., White, PJ, Graham J King, Ó Lochlainn, Seosamh, May, S. T., Hammond, JP, Love, Christopher G., Love, CG, Helen C Bowen, John P Hammond, Seosamh O Lochlainn, King, GJ, King, G. J., King, Graham J., Broadley, M. R., Broadley Martin R., May, Sean T., Bowen Helen C., Martin R. Broadley, Sean T May, Martin R Broadley, White, P. J., King , Graham J., Love, C. G., Neil S. Graham, White Philip J., White, Philip J., Graham Neil S., Lochlainn, SO, Bowen, Helen C.   +54 more
core   +1 more source

Detection of minority variants within bovine respiratory syncytial virus populations using oligonucleotide-based microarrays [PDF]

, 2008
Microarray technology, originally developed for highly parallel examination of gene expression is regarded as a potential tool in prognosis and diagnosis.
Leberre, Véronique, LE BERRE, Véronique, Baranowski, Eric, François, Jean Marie, Deplanche, Martine, Trouilh, Lidwine   +5 more
core   +1 more source

Optimising the analysis of transcript data using high density oligonucleotide arrays and genomic DNA-based probe selection [PDF]

, 2007
Background: Affymetrix GeneChip arrays are widely used for transcriptomic studies in a diverse range of species. Each gene is represented on a GeneChip array by a probe-set, consisting of up to 16 probe-pairs. Signal intensities across probe-pairs within
Sean T May, Martin R Broadley, John P Hammond, Graham Neil S, Neil S Graham, Philip J White, Broadley Martin R, Graham, Neil S., White, Philip J., Hammond John P, White Philip J, May Sean T, Broadley, Martin R., Hammond, John P., May, Sean T.   +14 more
core   +1 more source

Using genomic DNA-based probe-selection to improve the sensitivity of high-density oligonucleotide arrays when applied to heterologous species [PDF]

, 2005
High-density oligonucleotide (oligo) arrays are a powerful tool for transcript profiling. Arrays based on GeneChip® technology are amongst the most widely used, although GeneChip® arrays are currently available for only a small number of plant and animal
Craigon, David J., Townsend Henrik J, Sean T May, Emmerson Zoe F, Emmerson, Zoe F., Townsend, Henrik J., Martin R Broadley, John P Hammond, Henrik J Townsend, Janet Higgins, Philip J White, Broadley Martin R, Higgins Janet, Higgins, Janet, White, Philip J., Hammond John P, White Philip J, Craigon David J, May Sean T, Broadley, Martin R., Hammond, John P., David J Craigon, May, Sean T., Zoe F Emmerson   +23 more
core   +1 more source

Transcript-specific expression profiles derived from sequence-based analysis of standard microarrays [PDF]

, 2009
Background: Alternative mRNA processing mechanisms lead to multiple transcripts (i.e. splice isoforms) of a given gene which may have distinct biological functions.
Clemens D Cohen, Nelson Peter J., Moll, Anton G., Moll Anton G., Ralf Zimmer, Maja T. Lindenmeyer, Lindenmeyer, M T, Cohen Clemens D., Nelson, Peter J., Nelson, P J, Kretzler, Matthias, Zimmer, Ralf, Zimmer Ralf, Anton G Moll, Maja T Lindenmeyer, Cohen, Clemens D., Kretzler, M, Anton G. Moll, Matthias Kretzler, Lindenmeyer, Maja T., Cohen, C D, Peter J. Nelson, Moll, A G, Peter J Nelson, Zimmer, R, Kretzler Matthias, Lindenmeyer Maja T., Clemens D   +27 more
core   +1 more source

Comparison of three microarray probe annotation pipelines: differences in strategies and their effect on downstream analysis [PDF]

, 2009
BACKGROUND: Reliable annotation linking oligonucleotide probes to target genes is essential for functional biological analysis of microarray experiments.
Groenen, M.A., Leunissen, J.A., Neerincx, P.B.T., Groenen, M.A.M., Pierrot Casel, Casel, P., Michael Watson, Neerincx, P.B., Christophe Klopp, Klopp, C., Pieter Neerincx, Dennis Prickett, Martien Groenen, Nie, H., Jack Leunissen, Haisheng Nie, Watson, M., Leunissen, J.A.M., Prickett, D.   +18 more
core   +1 more source

A Revised Design for Microarray Experiments to Account for Experimental Noise and Uncertainty of Probe Response [PDF]

, 2014
Background Although microarrays are analysis tools in biomedical research, they are known to yield noisy output that usually requires experimental confirmation.
Noble, P., Alex E. Pozhitkov (62910), Bryk, Jarek, Pozhitkov, A., Kaderali, Lars, Pozhitkov Alex E., Tautz Diethard, Tautz, D. ; https://orcid.org/, Alex E. Pozhitkov, Bryk, Jaroslaw, Diethard Tautz, Jarosław Bryk, Pozhitkov, Alex E., Peter A Noble, Diethard Tautz (17015), Noble Peter A., Jarosław Bryk (47108), Peter A. Noble, Bryk Jarosław, Bryk, J., Alex E Pozhitkov, Peter A. Noble (17009), Noble, Peter A., Tautz, Diethard   +23 more
core   +2 more sources

New methods to analyse microarray data that partially lack a reference signal. [PDF]

, 2009
BACKGROUND: Microarray-based Comparative Genomic Hybridisation (CGH) has been used to assess genetic variability between bacterial strains. Crucial for interpretation of microarray data is the availability of a reference to compare signal intensities to ...
Lindsay Jodi A, Fluit, AC, Rob JL Willems, Bonten, MJ, Willems Rob JL, Bonten Marc JM, Ad C Fluit, Carpaij, N, Lindsay, JA, Willems, RJ, Marc JM Bonten, Fluit Ad C, Jodi A Lindsay, Neeltje Carpaij, Carpaij Neeltje   +14 more
core   +1 more source

Relationship between the tissue-specificity of mouse gene expression and the evolutionary origin and function of the proteins [PDF]

, 2005
The combination of complete genome sequence information with expression data enables us to characterize the relationship between a protein's evolutionary origin or functional category and its expression pattern.
Thornton, Janet M, Bhattacharyya, Sumit, Massingham, Tim, Freeman, Tom C, Freilich, Shiri, Ponsting, Hannes, Lyons, Paul A   +6 more
core   +1 more source