Results 51 to 60 of about 1,440,104 (391)

Downstream control of upstream open reading frames: Figure 1. [PDF]

Genes & Development, 2006
Department of Environmental and Biomolecular Systems, Oregon Health and Science University, Beaverton, Oregon 97006, USA; Department of Molecular Microbiology and Immunology, Oregon Health and Science University, Portland, Oregon 97201, USA; Divisions of Human Biology and Clinical Research, Fred Hutchinson Cancer Research Center, Seattle, Washington ...
Adam P. Geballe, Matthew S. Sachs
openaire   +3 more sources

Identification and characterization of a novel non-structural protein of bluetongue virus [PDF]

, 2011
Bluetongue virus (BTV) is the causative agent of a major disease of livestock (bluetongue). For over two decades, it has been widely accepted that the 10 segments of the dsRNA genome of BTV encode for 7 structural and 3 non-structural proteins.
AA Van Dijk, AE Firth, AE Firth, AG Aminev, AG Aminev, AJ Wilson, Alessia Armezzani, Amr Bayoumy, Andrew Shaw, B Sherry, BJ Erasmus, C Gonzalez-Lopez, C Lee, C Vinson, CC Celma, CD DeMaula, CR Rinaldo Jr, D Grimm, E Calvo-Pinilla, E Calvo-Pinilla, E Matsuo, EL Nason, EW Rainsford, F Arnaud, FM Boisvert, Frazer Rixon, FW Bazer, G Sutton, G Van Heeke, Giulia Franzoni, I Schwartz-Cornil, JA Hiscox, JA Hiscox, JA Mertz, JM Grimes, JM Wehrfritz, Kathryn Allan, L Vazquez-Iglesias, LJ Reed, M Barro, M Boyce, M Boyce, M Caporale, M Caporale, M Marfori, M Mura, M Neville, M Palmarini, M Rojas, M Varela, MA Hofmann, Marco Caporale, Mark Heise, Massimo Palmarini, Matthew Golder, Maxime Ratinier, ME Peeples, MH Malim, MK Estes, MM Arnold, MR Michel, MR Yang, MS Lindstrom, N Feng, N Stauber, NJ Horscroft, NJ Maclachlan, NJ Maclachlan, NJ MacLachlan, NM Foster, P Franchi, P Gouet, P Jameson, P Roy, P Roy, PP Mertens, PP Mertens, PS Mellor, R Dulbecco, R Noad, R Volmer, RE Randall, RJ Owens, S Boulon, S Brandt, S Maan, S Maan, Sandro Filipe Nunes, SH Wang, SJ Wechsler, X Zhang, Z Han   +91 more
core   +4 more sources

Short Open Reading Frames and Their Encoded Peptides [PDF]

PROTEOMICS, 2018
In this article, the following sentences and reference were erroneously published: “In their technical brief, Khitun and Slavoff describe their workflow to detect and validate non-annotated proteins with non-AUG start sites. This proteomic detection method is also exemplified with the characterization of the non-AUG initiated small protein (alt-RPL36 ...
Rothnagel, Joseph, Menschaert, Gerben
openaire   +8 more sources

Expression of the murine cytomegalovirus glycoprotein H by recombinant vaccinia virus [PDF]

, 1994
The sequence of the gene encoding glycoprotein H (gH) of murine cytomegalovirus (MCMV) strain Smith was determined and compared with the sequence of the gH of MCMV strain K181. Transcriptional analysis showed that gH is encoded by a large mRNA of 5.0 kb,
Koszinowski, Ulrich H., Loh, Lambert C., Lucin, Pero, Messerle, Martin, Rapp, Maria   +4 more
core   +1 more source

ORFeus: a computational method to detect programmed ribosomal frameshifts and other non-canonical translation events

BMC Bioinformatics, 2023
Background In canonical protein translation, ribosomes initiate translation at a specific start codon, maintain a single reading frame throughout elongation, and terminate at the first in-frame stop codon.
Mary O. Richardson, Sean R. Eddy
doaj   +1 more source

Peptidomic discovery of short open reading frame-encoded peptides in human cells [PDF]

, 2014
The amount of the transcriptome that is translated into polypeptides is of fundamental importance. We developed a peptidomic strategy to detect short ORF (sORF)-encoded polypeptides (SEPs) in human cells. We identified 90 SEPs, 86 of which are novel, the
Budnik, Bogdan A., Cabili, Moran N., Karger, Amir, Levin, Joshua Z., Ma, Jiao, Mitchell, Andrew J., Rinn, John L., Saghatelian, Alan, Schwaid, Adam G., Slavoff, Sarah A.   +9 more
core   +1 more source

Temperature-dependent regulation of upstream open reading frame translation in S. cerevisiae

BMC Biology, 2019
Background Translation of an mRNA in eukaryotes starts at an AUG codon in most cases, but near-cognate codons (NCCs) such as UUG, ACG, and AUU can also be used as start sites at low levels in Saccharomyces cerevisiae.
Shardul D. Kulkarni, Fujun Zhou, Neelam Dabas Sen, Hongen Zhang, Alan G. Hinnebusch, Jon R. Lorsch   +5 more
doaj   +1 more source

A Proteomic Approach to Study the Biological Role of Hepatitis C Virus Protein Core+1/ARFP

Viruses, 2022
Hepatitis C virus is the major cause of chronic liver diseases and the only cytoplasmic RNA virus known to be oncogenic in humans. The viral genome gives rise to ten mature proteins and to additional proteins, which are the products of alternative ...
Vasileios Vrazas, Savvina Moustafa, Manousos Makridakis, Ioannis Karakasiliotis, Antonia Vlahou, Penelope Mavromara, Katerina R. Katsani   +6 more
doaj   +1 more source

Polygalacturonase and Polygalacturonase Inhibitor Protein: Gene Isolation and Transcription in Glycine max - Heterodera glycines Interactions

Molecular Plant-Microbe Interactions, 1999
The cell wall acts as the first line of defense during pathogen invasion. Polygalacturonases (PGs) are a class of cell-wall-modifying enzymes with precise temporal and organ-specific expression.
Ramamurthy Mahalingam, Gejiao Wang, Halina T. Knap   +2 more
doaj   +1 more source

A Human Short Open Reading Frame (sORF)-encoded Polypeptide That Stimulates DNA End Joining*

Journal of Biological Chemistry, 2014
Background: Large numbers of peptides encoded in human short open reading frames have been recently identified but not yet functionally characterized.
Sarah A. Slavoff, J. Heo, B. Budnik, L. Hanakahi, A. Saghatelian   +4 more
semanticscholar   +1 more source