Results 51 to 60 of about 41,121 (277)
Investigations of the Evolved Molecular Basis for Terpenoid Biosynthesis in Marine Sponges
Advanced Science, EarlyView.Confirming and extending a previous observation in another Bubarida sponge, genomic and functional analyses of A. cavernosa reveal that sponges retain the mevalonate pathway and employ single α‐domain T1TSs and UbiA‐type TSs for terpenoid biosynthesis. The absence of T1TSs clustering with other biosynthetic genes tentatively suggests, based on limited ...
Fangyan Chen +6 more
wiley +1 more source
IPA assembly for Hifi PacBio reads v1
, 2021 This protocol is regarding the assembly of plant genomes using HiFi data (PacBio Sequel II) using Improved Phase Assembly (IPA) tool.
Ardashir Kharabian Masouleh +2 more
openaire +1 more source
Mitochondrial DNA. Part B. Resources, 2020 The full-length mitochondrial genome of Muraenolepis orangiensis (Vaillant, 1888) was studied using PacBio platform and it is first report in a Muraenolepididae family.
Eunkyung Choi +8 more
doaj +1 more source
PacBio read length distribution.
, 2016 Almost 81% of PacBio reads have length of at least 2000 bps.
Seyed Abolfazl Motahari (3328818) +2 more
core +1 more source
Advanced Science, EarlyView.In colitis patients and mice, reduced Lactobacillus abundance is observed. Experimental studies show that L. plantarum A736 metabolizes dietary tryptophan into indole‐3‐lactic acid (ILA), while both L. plantarum A736 and ILA impact ChAT‐expressing enteric neurons and acetylcholine levels, thereby regulating intestinal immune responses and alleviating ...
Bing Xia +15 more
wiley +1 more source
Complex structural variant visualization with SVTopo
BMC GenomicsBackground Structural variants are genomic variants that impact at least 50 nucleotides. Structural variants can play major roles in diversity and human health.
Jonathan R. Belyeu +6 more
doaj +1 more source
The complete mitochondrial genome of Macrourus whitsoni (Gadiformes, Macrouridae)
Mitochondrial DNA. Part B. Resources, 2020 The complete mitochondrial genome of Macrourus witsoni was determined in this study by the Long-read Technology, such as PacBio Sequel System. The Long-read Technology, which can sequence continuously the whole vertebrate mitochondrial genome, allows ...
Seung Jae Lee +7 more
doaj +1 more source
LongQC: A Quality Control Tool for Third Generation Sequencing Long Read Data
G3: Genes, Genomes, Genetics, 2020 We propose LongQC as an easy and automated quality control tool for genomic datasets generated by third generation sequencing (TGS) technologies such as Oxford Nanopore technologies (ONT) and SMRT sequencing from Pacific Bioscience (PacBio).
Yoshinori Fukasawa +4 more
doaj +1 more source
Pacbio of Broiler chicken: cecum metagenome
, 2021 The goal is to sequence and assemble broiler chicken's intestine microbial meta-genome.
Mayank Murali
core +1 more source
Advanced Science, EarlyView.An optimized Cas9‐enriched nanopore sequencing workflow, combined with STRiker, enables simultaneous analysis of disease‐associated STR loci from patient blood. The nCATS–STRiker workflow detects repeat expansions, de novo repeat motifs, interruption patterns, and methylation in a single assay, improving the genetic diagnosis of previously undiagnosed ...
Seungbok Lee +11 more
wiley +1 more source