Results 61 to 70 of about 41,121 (277)

PacBio CCS Reads

open access: yes, 2015
Pacbio CCS raw reads, barcode information and primer sequences were used in MLSTEZ for generating consensus ...
Yuan Chen (9740)   +8 more
core   +1 more source

Oligosaccharides With Defined Glycosidic Bonds Shape Gut Microbial Succession and Metabolism Via Bond‐Specific Microbial Responders

open access: yesAdvanced Science, EarlyView.
Oligosaccharides with defined glycosidic bonds drive divergent gut microbial succession and shape unique metabolic profiles. Absolute time‐series profiling with Bayesian generalized Lotka–Volterra modeling identifies bond‐specific microbial responders, while monoculture validation and metaproteomics reveal linkage‐matched transport and cleavage modules.
Xiaoxuan Lu   +10 more
wiley   +1 more source

PacBio Isoseq samples preparation v1

open access: yes, 2023
This protocol described how to prepare samples for PacBio Isoseq
openaire   +1 more source

IPA assembly for PacBio Hifi reads v1

open access: yes, 2021
This protocol is regarding the assembly of plant genomes using HiFi data (PacBio Sequel II) with Improved Phase Assembly (IPA) tool.
Priyanka Sharma   +11 more
openaire   +1 more source

3904 PacBio raw reads of Monsonia emarginata

open access: yes, 2017
Corrected PacBio reads greater than 1 ...
John C. Blazier (3284253)   +9 more
core   +1 more source

PacBio Full-length 16S Sequencing data

open access: yes, 2023
This is the data from our study "Alterations in Gut Microbiota and Non-Motor Symptoms Following Pharmacological and Surgical Treatments in Parkinson's Disease Patients".  DNA was amplified using dual-unique barcoded primers targeting 16S-ITS-23S, the so-
Bahtiyar Yilmaz (5872634)
core   +1 more source

A Postbiotic‐Inducing Ganoderma applanatum Polysaccharide Repairs the Intestinal Barrier via a Phocaeicola vulgatus ‐ Tridecylic Acid Axis

open access: yesAdvanced Science, EarlyView.
This study identifies GAP2, a bioactive polysaccharide fraction derived from Ganoderma applanatum, as a postbiotic inducer that repairs intestinal barrier damage in a gut microbiota‐dependent manner. GAP2 enriches Phocaeicola vulgatus, which degrades GAP2 and promotes tridecylic acid production, triggering Rho/CDC42 signaling and tight‐junction ...
Chuan Zhang   +10 more
wiley   +1 more source

PacBio sequencing output for each SMRT cell.

open access: yes, 2019
PacBio sequencing output for each SMRT cell.
Narjol González-Escalona (280578)   +4 more
core   +1 more source

Gapless Complete Genome and Multi‐Omics Illuminate Immune Adaptation and Host‐Virus Interactions in a Coronavirus Reservoir

open access: yesAdvanced Science, EarlyView.
We present a complete T2T genome assembly for a key bat reservoir. Integrating population genomics, comparative genomics, transcriptomics, single‐cell omics, and functional assays, we resolve previously inaccessible genomic regions and identify evolutionary signatures associated with immune adaptation.
Yuting Wang   +15 more
wiley   +1 more source

Aardvark: sifting through differences in a mound of variants

open access: yesGenome Biology
Variant benchmarking is critical in assessing the accuracy of genomic secondary pipelines. However, traditional benchmarking tools that require exact genotype matches inject biases from variant representation and are ill-suited for tandem repeat or ...
James M. Holt   +7 more
doaj   +1 more source

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