Results 121 to 130 of about 2,963 (216)

e3SIM: Epidemiological‐ecological‐evolutionary simulation framework for genomic epidemiology

open access: yesMethods in Ecology and Evolution, Volume 17, Issue 4, Page 1051-1059, April 2026.
Abstract Infectious disease dynamics result from the complex interplay of epidemiological, ecological and evolutionary (epi‐eco‐evo) processes. Accurately modelling these coupled processes is crucial for understanding pathogen spread and informing public health strategies.
Peiyu Xu   +14 more
wiley   +1 more source

Data_Sheet_1_Updating the Phylodynamics of Yellow Fever Virus 2016–2019 Brazilian Outbreak With New 2018 and 2019 São Paulo Genomes.docx

open access: yes, 2022
The recent outbreak of yellow fever (YF) in São Paulo during 2016–2019 has been one of the most severe in the last decades, spreading to areas with low vaccine coverage. The aim of this study was to assess the genetic diversity of the yellow fever virus (
Ana Paula Moreira Salles (6720122)   +9 more
core   +1 more source

Scientists' Warning on the Rapid Evolution of Parasites in the Anthropocene

open access: yesEvolutionary Applications, Volume 19, Issue 4, April 2026.
ABSTRACT Human activities are changing the natural world at an accelerating pace, and as a consequence exerting novel and often strong selection pressures on living organisms. For species with traits conferring huge inherent evolutionary potential, like parasites, the outcome may be rapid adaptive responses spanning multiple phenotypic traits. The rise
Robert Poulin   +30 more
wiley   +1 more source

Image_6_Updating the Phylodynamics of Yellow Fever Virus 2016–2019 Brazilian Outbreak With New 2018 and 2019 São Paulo Genomes.JPEG

open access: yes, 2022
The recent outbreak of yellow fever (YF) in São Paulo during 2016–2019 has been one of the most severe in the last decades, spreading to areas with low vaccine coverage. The aim of this study was to assess the genetic diversity of the yellow fever virus (
Ana Paula Moreira Salles (6720122)   +9 more
core   +1 more source

Image_7_Updating the Phylodynamics of Yellow Fever Virus 2016–2019 Brazilian Outbreak With New 2018 and 2019 São Paulo Genomes.JPEG

open access: yes, 2022
The recent outbreak of yellow fever (YF) in São Paulo during 2016–2019 has been one of the most severe in the last decades, spreading to areas with low vaccine coverage. The aim of this study was to assess the genetic diversity of the yellow fever virus (
Ana Paula Moreira Salles (6720122)   +9 more
core   +1 more source

The contrasting phylodynamics of human influenza B viruses

open access: yeseLife, 2015
A complex interplay of viral, host, and ecological factors shapes the spatio-temporal incidence and evolution of human influenza viruses. Although considerable attention has been paid to influenza A viruses, a lack of equivalent data means that an integrated evolutionary and epidemiological framework has until now not been available for influenza B ...
Vijaykrishna, D   +27 more
openaire   +8 more sources

Integrated nested laplace approximation for bayesian nonparametric phylodynamics [PDF]

open access: yes, 2012
The goal of phylodynamics, an area on the intersection of phylogenetics and population genetics, is to reconstruct population size dynamics from genetic data.
Palacios, JA, Minin, VN
core   +1 more source

Phylodynamic and Epistatic Analysis of Coxsackievirus A24 and Its Variant

open access: yesViruses
Coxsackievirus A24 (CV-A24) is a human enterovirus that causes acute flaccid paralysis. However, a Coxsackievirus A24 variant (CV-A24v) is the most common cause of eye infections.
Chia-Chi Cheng   +5 more
doaj   +1 more source

Image_5_Updating the Phylodynamics of Yellow Fever Virus 2016–2019 Brazilian Outbreak With New 2018 and 2019 São Paulo Genomes.JPEG

open access: yes, 2022
The recent outbreak of yellow fever (YF) in São Paulo during 2016–2019 has been one of the most severe in the last decades, spreading to areas with low vaccine coverage. The aim of this study was to assess the genetic diversity of the yellow fever virus (
Ana Paula Moreira Salles (6720122)   +9 more
core   +1 more source

An efficient Bayesian inference framework for coalescent-based nonparametric phylodynamics [PDF]

open access: yes, 2015
MotivationThe field of phylodynamics focuses on the problem of reconstructing population size dynamics over time using current genetic samples taken from the population of interest. This technique has been extensively used in many areas of biology but is
Shahbaba, Babak   +6 more
core   +1 more source

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