Results 131 to 140 of about 2,036 (163)

Single-cell phylodynamics reveal rapid late-stage colorectal cancer expansions

Alves JM, Chen K, Prado-López S, Estévez-Gómez N, Alvariño P, Alonso J, Valecha M, Tomás L, Zwaans A, Stolz U, Stadler T, Chantada D, Cameselle-Teijeiro JM, Drummond A, Posada D.   +14 more
europepmc   +1 more source

Integrating Contact Tracing Data to Enhance Outbreak Phylodynamic Inference: A Deep Learning Approach. [PDF]

Mol Biol Evol
Xie R, Adam DC, Hu S, Cowling BJ, Gascuel O, Zhukova A, Dhanasekaran V.   +6 more
europepmc   +1 more source

Phylodynamics for Human Immunodeficiency Virus Prevention: A Miami-Dade County Case Study. [PDF]

J Infect Dis
Mehta SR, Wells AB, Cohen C, Campbell A, Truong M, Little SJ, Chaillon A.   +6 more
europepmc   +1 more source

The classification, origin, and evolutionary dynamics of severe fever with thrombocytopenia syndrome virus circulating in East Asia. [PDF]

Virus Evol
Sang S, Chen P, Li C, Zhang A, Wang Y, Liu Q.   +5 more
europepmc   +1 more source

Accounting for contact tracing in epidemiological birth-death models. [PDF]

PLoS Comput Biol
Zhukova A, Gascuel O.
europepmc   +1 more source

Tn<i>4401</i>/Tn<i>7247</i> transposon-derived structures driving the cross-transmission of <i>bla</i> _KPC among plasmids and chromosomes in clinical carbapenem-resistant <i>Pseudomonas aeruginosa</i>. [PDF]

Curr Res Microb Sci
Chen S, Jia X, Gao H, Zhu Y, Li Z, Jia P, Liu X, Yu W, Chu X, Zhang Q, Yang Q.   +10 more
europepmc   +1 more source

Utility of various genome lengths in diversity and evolution analyses of Hepatitis E virus. [PDF]

Virus Res
Hakze-van der Honing RW, Franz E, van der Poel WHM, Coipan CE.   +3 more
europepmc   +1 more source

Genomic Modeling of an Outbreak of Multidrug-Resistant Shigella sonnei, California, USA, 2023-2024. [PDF]

Emerg Infect Dis
Lloyd T, Khan SM, Heaton D, Shemsu M, Varghese V, Graham J, Gregory M, Dorfman P, Talton M, DeVol J, Müller NF, Trivedi KK.   +11 more
europepmc   +1 more source

Genomic Epidemiology for Estimating Pathogen Burden in a Population. [PDF]

Emerg Infect Dis
Porter WT, Engelthaler DM, Hepp CM.
europepmc   +1 more source

Phylodynamics beyond neutrality: the impact of incomplete purifying selection on viral phylogenies and inference. [PDF]

Philos Trans R Soc Lond B Biol Sci
Koelle K, Rasmussen DA.
europepmc   +1 more source