Results 21 to 30 of about 2,036 (163)
Adaptive preferential sampling in phylodynamics
ArXiv, 2020 Longitudinal molecular data of rapidly evolving viruses and pathogens provide information about disease spread and complement traditional surveillance approaches based on case count data. The coalescent is used to model the genealogy that represents the sample ancestral relationships.
Cappello, Lorenzo, Palacios, Julia A.
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Life, 2021 Background: The spatiotemporal profiling of molecular transmission clusters (MTCs) using viral genomic data can effectively identify transmission networks in order to inform public health actions targeting SARS-CoV-2 spread. Methods: We used whole genome
Maria Bousali +15 more
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Phylogeography and Biological Characterizations of H12 Influenza A Viruses
Viruses, 2022 Influenza A virus (IAV) is widespread in wild bird reservoirs. Sixteen hemagglutinin subtypes are associated with wild waterfowl hosts; some subtypes are isolated infrequently, one of which is H12 IAV.
Zhimin Wan +12 more
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Update on the Phylodynamics of SADS-CoV [PDF]
Life, 2021 Coronaviruses are known to be harmful and heterogeneous viruses, able to infect a large number of hosts. Among them, SADS-CoV (Swine Acute Diarrhea Syndrome Coronavirus), also known as PEAV (Porcine Enteric Alphacoronavirus), or SeA-CoV (Swine Enteric Alphacoronavirus), is the most recent Alphacoronavirus discovered, and caused several outbreaks ...
Fabio Scarpa +10 more
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Phylodynamic applications in 21st century global infectious disease research
Global Health Research and Policy, 2017 Background Phylodynamics, the study of the interaction between epidemiological and pathogen evolutionary processes within and among populations, was originally defined in the context of rapidly evolving viruses and used to characterize transmission ...
Brittany D Rife +6 more
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Molecular Basis of the Toxigenic Vibrio cholerae O1 Serotype Switch from Ogawa to Inaba in Haiti
Microbiology Spectrum, 2023 Toxigenic Vibrio cholerae O1 serotype Ogawa was introduced involuntarily into Haiti in October 2010, and virtually all of the clinical strains isolated during the first 5 years of the epidemic were Ogawa.
Taylor K. Paisie +6 more
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Phylodynamic of HCV Populations
Annals of the Russian academy of medical sciences, 2015 Hepatitis C virus is an actual public health problem worldwide since its discovering in 1989. It is explained not only by the wide spreading andfrequent adverse outcomes of disease, the lack of effective preventive vaccine, but also by the high genetic variability of the virus.
O V, Kalinina, A B, Zhebrun
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Frontiers in Microbiology, 2019 This study analyzes the HIV-1 subtype diversity and its phylodynamics in Moscow region, which is the most densely populated area of Russia characterized by high rates of internal and external migration.
Aleksey Lebedev +5 more
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Viruses, 2020 Tailoring public health responses to growing HIV transmission clusters depends on accurately mapping the risk network through which it spreads and identifying acute infections that represent the leading edge of cluster growth.
Ellsworth M. Campbell +9 more
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An Ecological and Conservation Perspective on Advances in the Applied Virology of Zoonoses
Viruses, 2011 The aim of this manuscript is to describe how modern advances in our knowledge of viruses and viral evolution can be applied to the fields of disease ecology and conservation.
Jonathan H. Epstein +2 more
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