Results 21 to 30 of about 542,906 (295)
Deciphering protein-protein interactions. Part I. Experimental techniques and databases. [PDF]
PLoS Computational Biology, 2007 Benjamin A Shoemaker, Anna R Panchenko
doaj +3 more sources
Protein Databases Related to Liquid–Liquid Phase Separation [PDF]
International Journal of Molecular Sciences, 2020 Qian Li, Weishan Yang, Beifang Huang
exaly +2 more sources
Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases [PDF]
Nucleic Acids Research, 2019 Ole K Tørresen +2 more
exaly +2 more sources
Optimizing metaproteomics database construction: lessons from a study of the vaginal microbiome
mSystems, 2023 Metaproteomics, a method for untargeted, high-throughput identification of proteins in complex samples, provides functional information about microbial communities and can tie functions to specific taxa.
Elliot M. Lee +8 more
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The Halophile Protein Database [PDF]
Database, 2014 Halophilic archaea/bacteria adapt to different salt concentration, namely extreme, moderate and low. These type of adaptations may occur as a result of modification of protein structure and other changes in different cell organelles. Thus proteins may play an important role in the adaptation of halophilic archaea/bacteria to saline conditions.
Naveen Sharma +6 more
openaire +2 more sources
The Protein Mutant Database [PDF]
Nucleic Acids Research, 1999 Currently the protein mutant database (PMD) contains over 81 000 mutants, including artificial as well as natural mutants of various proteins extracted from about 10 000 articles. We recently developed a powerful viewing and retrieving system (http://pmd.ddbj.nig.ac.jp), which is integrated with the sequence and tertiary structure databases. The system
Takeshi Kawabata +2 more
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Protein Databases on the Internet [PDF]
Current Protocols in Molecular Biology, 2000 AbstractProtein databases have become a crucial part of modern biology. Huge amounts of data for protein structures, functions, and particularly sequences are being generated. Searching databases is often the first step in the study of a new protein. Comparison between proteins and between protein families in databases provides information about the ...
Dong, Xu, Ying, Xu
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Compressive genomics for protein databases. [PDF]
Bioinformatics, 2013 Abstract Motivation: The exponential growth of protein sequence databases has increasingly made the fundamental question of searching for homologs a computational bottleneck. The amount of unique data, however, is not growing nearly as fast; we can exploit this fact to greatly accelerate homology search.
Daniels NM +5 more
europepmc +7 more sources
Databases in Protein Crystallography [PDF]
Acta Crystallographica Section D Biological Crystallography, 1998 Applications of structural databases in the protein crystallographic structure determination process are reviewed, using mostly examples from work carried out by the authors. Four application areas are discussed: model building, model refinement, model validation and model analysis.
G J, Kleywegt, T A, Jones
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Virus Pop—Expanding Viral Databases by Protein Sequence Simulation
Viruses, 2023 The improvement of our knowledge of the virosphere, which includes unknown viruses, is a key area in virology. Metagenomics tools, which perform taxonomic assignation from high throughput sequencing datasets, are generally evaluated with datasets derived
Julia Kende +6 more
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