Toward the regularization of E value from BLAST similarity search into a dissimilarity measure as distance function, and the metrication of protein sequence space. [PDF]
Brief BioinformMao B.
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De novo functional protein sequence generation: overcoming data scarcity through regeneration and large language models. [PDF]
Brief BioinformRen C, He D, Huang J.
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ViralBindPredict: empowering viral protein-ligand binding sites through deep learning and protein sequence-derived insights. [PDF]
GigascienceAmorim AMB +7 more
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Zoon0PredV: Potential Virus Species Crossover Prediction Using Convolutional Neural Networks and Viral Protein Sequence Patterns. [PDF]
Bioinform Biol InsightsSerage RA +4 more
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Tokenized and continuous embedding compressions of protein sequence and structure. [PDF]
Patterns (N Y)Lu AX +7 more
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PS3N: leveraging protein sequence-structure similarity for novel drug-drug interaction discovery. [PDF]
Sci RepIslam S +5 more
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Protein sequence modelling with Bayesian flow networks. [PDF]
Nat CommunAtkinson T +9 more
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Gaia: An AI-enabled genomic context-aware platform for protein sequence annotation. [PDF]
Sci AdvJha N +7 more
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Design of linear and cyclic peptide binders from protein sequence information. [PDF]
Commun ChemLi Q, Vlachos EN, Bryant P.
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DivPro: diverse protein sequence design with direct structure recovery guidance. [PDF]
BioinformaticsZhou X, Shen G, Chen Y, Chen G, Heng PA.
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