Results 1 to 10 of about 5,571,680 (191)

De novo assembly of the cattle reference genome with single-molecule sequencing [PDF]

GigaScience, 2020
Background Major advances in selection progress for cattle have been made following the introduction of genomic tools over the past 10–12 years. These tools depend upon the Bos taurus reference genome (UMD3.1.1), which was created using now-outdated ...
B. Rosen, D. Bickhart, R. Schnabel, S. Koren, C. Elsik, Elizabeth Tseng, T. Rowan, W. Low, A. Zimin, C. Couldrey, R. Hall, Wenli Li, A. Rhie, Jay Ghurye, S. McKay, F. Thibaud-Nissen, J. Hoffman, B. Murdoch, W. Snelling, T. McDaneld, J. Hammond, J. Schwartz, Wilson Nandolo, D. Hagen, Christian Dreischer, Sebastian J. Schultheiss, Steven G. Schroeder, A. Phillippy, J. Cole, Curtis P Van Tassell, G. Liu, T. Smith, J. Medrano   +32 more
semanticscholar   +3 more sources

Improved reference genome of the arboviral vector Aedes albopictus [PDF]

Genome Biology, 2020
The Asian tiger mosquito Aedes albopictus is globally expanding and has become the main vector for human arboviruses in Europe. Here we present AalbF2, a dramatically improved assembly of the Ae.
U. Palatini, Reem A. Masri, L. Cosme, S. Koren, F. Thibaud-Nissen, J. Biedler, F. Krsticevic, J. Johnston, Rebecca Halbach, J. Crawford, I. Antoshechkin, A. Failloux, Elisa Pischedda, Michele Marconcini, Jay Ghurye, A. Rhie, Atashi Sharma, Dmitry A. Karagodin, Jeremy F. Jenrette, Stephanie Gamez, Pascal Miesen, Patrick Masterson, A. Caccone, M. Sharakhova, Z. Tu, P. Papathanos, R. V. van Rij, O. Akbari, J. Powell, A. Phillippy, M. Bonizzoni   +30 more
semanticscholar   +7 more sources

A reference genome for pea provides insight into legume genome evolution

Nature Genetics, 2019
We report the first annotated chromosome-level reference genome assembly for pea, Gregor Mendel’s original genetic model. Phylogenetics and paleogenomics show genomic rearrangements across legumes and suggest a major role for repetitive elements in pea ...
Jonathan Kreplak, Mohammed-Amin Madoui, Petr Cápal   +2 more
exaly   +2 more sources

An Improved Melon Reference Genome With Single-Molecule Sequencing Uncovers a Recent Burst of Transposable Elements With Potential Impact on Genes

Frontiers in Plant Science, 2020
The published melon (Cucumis melo L.) reference genome assembly (v3.6.1) has still 41.6 Mb (Megabases) of sequences unassigned to pseudo-chromosomes and about 57 Mb of gaps.
Raúl Castanera, Valentino Ruggieri, Valentino Ruggieri, Marta Pujol, Marta Pujol, Jordi Garcia-Mas, Jordi Garcia-Mas, Josep M. Casacuberta   +7 more
doaj   +2 more sources

Shifting the limits in wheat research and breeding using a fully annotated reference genome

Science, 2018
Rudi Appels, Kellye A Eversole, Nils Stein   +2 more
exaly   +2 more sources

Genome sequences of 14 Firmicutes strains isolated from the human vagina [PDF]

, 2016
Research on vaginal infections is currently limited by a lack of available fully sequenced bacterial reference strains. Here, we present strains (now available through BEI Resources) and genome sequences for a set of 14 vaginal isolates from the phylum ...
Deitzler, Grace E, Hallsworth-Pepin, Kymberlie, Lewis, Amanda L, Lewis, Warren G, Mitreva, Makedonka, Park, SoEun, Robinson, Lloyd, Ruiz, Maria J, Weimer, Cory, Wollam, Aye   +9 more
core   +11 more sources

The Gene Ontology's Reference Genome Project: a unified framework for functional annotation across species. [PDF]

PLoS Computational Biology, 2009
The Gene Ontology (GO) is a collaborative effort that provides structured vocabularies for annotating the molecular function, biological role, and cellular location of gene products in a highly systematic way and in a species-neutral manner with the aim ...
Reference Genome Group of the Gene Ontology Consortium
doaj   +1 more source

The complete reference genome for grapevine (Vitis vinifera L.) genetics and breeding

Horticulture Research, 2023
Grapevine is one of the most economically important crops worldwide. However, the previous versions of the grapevine reference genome tipically consist of thousands of fragments with missing centromeres and telomeres, limiting the accessibility of the ...
Xiaoya Shi, Shuo Cao, Xu Wang, Siyang Huang, Yue Wang, Zhong-xiang Liu, Wenwen Liu, X. Leng, Yanling Peng, Nan Wang, Yiwen Wang, Zhiyao Ma, Xiaodong Xu, Fan Zhang, H. Xue, H. Zhong, Yi Wang, Kekun Zhang, A. Velt, K. Avia, Daniela Holtgräwe, J. Grimplet, J. T. Matus, D. Ware, Xinyu Wu, Haibo Wang, Chonghuai Liu, Yu-lin Fang, C. Rustenholz, Z. Cheng, Hua Xiao, Yongfeng Zhou   +31 more
semanticscholar   +1 more source

Inflammatory Nasal Swelling due to Leishmania tropica

Case Reports in Dermatological Medicine, 2021
Since its discovery in the 19th century, cutaneous leishmaniasis has been a major public health problem, especially with the appearance of more and more unusual cases of cutaneous lesions due to this parasite. Indeed, the present study joins the previous
Hajiba Fellah, Maryam Hakkour, Bouchra Delouane, Asmae Hmamouch, Abdelhakim Bouyahya, Faiza Sebti, Abderrahim Sadak   +6 more
doaj   +1 more source

Genomic surveillance of Neisseria gonorrhoeae in the Philippines, 2013–2014

Western Pacific Surveillance and Response, 2021
Antimicrobial-resistant Neisseria gonorrhoeae is a major threat to public health and is of particular concern in the Western Pacific Region, where the incidence of gonorrhoea is high.
Manuel C. Jamoralin, Jr, Silvia Argimon, Marietta L. Lagrada, Alfred S. Villamin, Melissa L. Masim, June M. Gayeta, Karis D. Boehme, Agnettah M. Olorosa, Sonia B. Sia, Charmian M. Hufano, Victoria Cohen, Lara T. Hernandez, Benjamin Jeffrey, Khalil Abudahab, John Stelling, Matthew T.G. Holden, David M. Aanensen, Celia C. Carlos   +17 more
doaj   +1 more source