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Gemella bacteraemia characterised by 16S ribosomal RNA gene sequencing [PDF]
Journal of Clinical Pathology, 2003 To define epidemiology, clinical disease, and outcome of gemella bacteraemia by 16S rRNA gene sequencing. To examine the usefulness of the Vitek, API, and ATB systems in identifying two gemella species.All alpha haemolytic streptococci other than Streptococcus pneumoniae isolated from blood cultures during a six year period were identified by ...
Yung, RWH +5 more
openaire +5 more sources
Detection of Enterobacter sakazakii in neonatal sepsis by PCR on 16S ribosomal RNA
Iranian South Medical Journal, 2014 Background: Enterobacter sakazakii is a gram negative, facultative anaerobic, straight rod-shaped bacterium that belongs to the family Enterobacteriaceae.
Khadijeh Ahmadi +4 more
doaj
First case of Nocardia nova spinal abscess in an immunocompetent patient
Brazilian Journal of Infectious DiseasesNocardia are a group of aerobic actinomycetes that are filamentous gram-positive, weakly acid-fast, and cause opportunistic infection in immunocompromised patients.
Seung Bok Hong +4 more
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RNA–DNA differences in human mitochondria restore ancestral form of 16S ribosomal RNA
Genome Research, 2013 RNA transcripts are generally identical to the underlying DNA sequences. Nevertheless, RNA–DNA differences (RDDs) were found in the nuclear human genome and in plants and animals but not in human mitochondria.
Dan Bar-Yaacov +8 more
semanticscholar +1 more source
16S rRNA sequencing analysis: the devil is in the details
Gut Microbes, 2020 User-friendly computational tools for 16S ribosomal RNA (rRNA) sequencing analysis enable researchers who are not bioinformaticians to analyze and interpret sequencing data from microbial communities.
Amy M. Tsou +3 more
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The Beak of Eukaryotic Ribosomes: Life, Work and Miracles
BiomoleculesRibosomes are not totally globular machines. Instead, they comprise prominent structural protrusions and a myriad of tentacle-like projections, which are frequently made up of ribosomal RNA expansion segments and N- or C-terminal extensions of ribosomal ...
Sara Martín-Villanueva +4 more
doaj +1 more source
Systematic processing of ribosomal RNA gene amplicon sequencing data
GigaScience, 2019 Background With the advent of high-throughput sequencing, microbiology is becoming increasingly data-intensive. Because of its low cost, robust databases, and established bioinformatic workflows, sequencing of 16S/18S/ITS ribosomal RNA (rRNA) gene ...
J. Tremblay, É. Yergeau
semanticscholar +1 more source
Psychrobacter sanguinis Wound Infection Associated with Marine Environment Exposure, Washington, USA
Emerging Infectious Diseases, 2018 We report a 26-year-old man with Psychrobacter sanguinis cellulitis of a wound sustained during ocean fishing in Washington, USA, in 2017. Psychrobacter spp. are opportunistic pathogens found in a wide range of environments. Clinicians should be aware of
Jesse Bonwitt +4 more
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Evolution of protein-coupled RNA dynamics during hierarchical assembly of ribosomal complexes
Nature Communications, 2017 Ribosomes assemble through the hierarchical addition of proteins to a ribosomal RNA scaffold. Here the authors use three-color single-molecule FRET to show how the dynamics of the rRNA dictate the order in which multiple proteins assemble on the 5 ...
Sanjaya C. Abeysirigunawardena +7 more
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Origin of the 16S Ribosomal Molecule from Ancestor tRNAs
Journal of Molecular Evolution, 2019 We tested the hypothesis that concatemers of ancestral tRNAs gave rise to the 16S ribosomal RNA. We built an ancestral sequence of proto-tRNAs that showed a significant identity of 51.69% and a percentage of structural identity of 0.941 with the 3′ upper
S. T. de Farias, T. G. Rêgo, M. José
semanticscholar +1 more source