Results 11 to 20 of about 147,904 (284)

Experience and Insight Into Genetic Diagnosis of Infective Aortic Aneurysm [PDF]

open access: yesClinical Case Reports
Culture‐negative infected aneurysms possibly occur in various clinical situations, including prior antibiotic exposure. Accurate microbial identification is crucial for an optimal antimicrobial strategy.
Shinnosuke Fukushima   +3 more
doaj   +2 more sources

A Mutant Era GTPase Suppresses Phenotypes Caused by Loss of Highly Conserved YbeY Protein in Escherichia coli

open access: yesFrontiers in Microbiology, 2022
Ribosome assembly is a complex fundamental cellular process that involves assembling multiple ribosomal proteins and several ribosomal RNA species in a highly coordinated yet flexible and resilient manner.
Vignesh M. P. Babu   +3 more
doaj   +1 more source

Computer modeling 16 S ribosomal RNA [PDF]

open access: yesJournal of Molecular Biology, 1991
A three-dimensional structure for 16 S RNA has been produced with a computer protocol that is not dependent on human intervention. This protocol improves upon traditional modeling techniques by using distance geometry to fold the molecule in an objective and reproducible fashion.
J M, Hubbard, J E, Hearst
openaire   +2 more sources

Considerations and best practices in animal science 16S ribosomal RNA gene sequencing microbiome studies

open access: yesJournal of Animal Science, 2022
Microbiome studies in animal science using 16S rRNA gene sequencing have become increasingly common in recent years as sequencing costs continue to fall and bioinformatic tools become more powerful and user-friendly. The combination of molecular biology,
M. Weinroth   +16 more
semanticscholar   +1 more source

A comparison of structural and evolutionary attributes of Escherichia coli and Thermus thermophilus small ribosomal subunits: signatures of thermal adaptation. [PDF]

open access: yesPLoS ONE, 2013
Here we compare the structural and evolutionary attributes of Thermus thermophilus and Escherichia coli small ribosomal subunits (SSU). Our results indicate that with few exceptions, thermophilic 16S ribosomal RNA (16S rRNA) is densely packed compared to
Saurav Mallik, Sudip Kundu
doaj   +1 more source

Selection of reference genes for expression analysis using quantitative real-time PCR in the pea aphid, Acyrthosiphon pisum (Harris) (Hemiptera, Aphidiae). [PDF]

open access: yesPLoS ONE, 2014
To facilitate gene expression study and obtain accurate qRT-PCR analysis, normalization relative to stable expressed housekeeping genes is required. In this study, expression profiles of 11 candidate reference genes, including actin (Actin), elongation ...
Chunxiao Yang   +3 more
doaj   +1 more source

Mutations in 16S ribosomal RNA disrupt antibiotic-RNA interactions. [PDF]

open access: yesThe EMBO Journal, 1989
Two of six mutations at a base-paired site in Escherichia coli 16S rRNA confer resistance to nine different aminoglycoside antibiotics in vivo. Chemical probing of mutant and wild-type ribosomes in the presence of paromomycin indicates that interactions between the antibiotic and 16S rRNA in mutant ribosomes are disrupted.
E A, De Stasio   +3 more
openaire   +2 more sources

16S-ITGDB: An Integrated Database for Improving Species Classification of Prokaryotic 16S Ribosomal RNA Sequences

open access: yesFrontiers in Bioinformatics, 2022
Analyzing 16S ribosomal RNA (rRNA) sequences allows researchers to elucidate the prokaryotic composition of an environment. In recent years, third-generation sequencing technology has provided opportunities for researchers to perform full-length sequence
Yu-Peng Hsieh   +9 more
doaj   +1 more source

Location of Ribosomal Protein Binding Sites on 16S Ribosomal RNA [PDF]

open access: yesProceedings of the National Academy of Sciences, 1972
The distribution of ribosomal protein binding sites on the 16S ribosomal RNA molecule has been analyzed by limited ribonuclease hydrolysis of RNA-protein complexes, as well as by the interaction of individual proteins with RNA fragments purified from partial enzymatic digests. Of the six 30S subunit proteins known to interact directly with
R A, Zimmermann   +4 more
openaire   +2 more sources

Evaluation and utility of mitochondrial ribosomal genes for molecular systematics of parasitic nematodes

open access: yesParasites & Vectors, 2020
Background Molecular advances have accelerated our understanding of nematode systematics and taxonomy. However, comparative analyzes between various genetic markers have led to discrepancies in nematode phylogenies.
Abigail Hui En Chan   +4 more
doaj   +1 more source

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