Results 141 to 150 of about 1,075,768 (202)

Metagenomic sequencing for surveillance of food- and waterborne viral diseases [PDF]

, 2017
A plethora of viruses can be transmitted by the food- and waterborne route. However, their recognition is challenging because of the variety of viruses, heterogeneity of symptoms, the lack of awareness of clinicians, and limited surveillance efforts ...
Koopmans D.V.M., M.P.G. (Marion), Nieuwenhuijse, D.F. (David F.)   +1 more
core   +3 more sources

Metagenomic next-generation sequencing-based characterization of the viral spectrum in clinical pulmonary and peripheral blood samples of patients

Frontiers in Cellular and Infection Microbiology
BackgroundMetagenomic next-generation sequencing (mNGS) enables comprehensive profiling of viral communities in clinical samples. However, comparative analyses of the virome across anatomical compartments and disease states remain limited.
Ning Zheng, Hai-Long Yu, Bing-Jie Zhang, Dan Wang, Ya-Liang Ji, Lu-Lu Dai, Wen Li, Sheng-Hui Li, Zhi-Liang Hu, Zhi-Liang Hu, Yi-Shan Zheng   +10 more
doaj   +1 more source

Cannabis virome reconstruction and antiviral rnai characterization by small rna sequencing [PDF]

, 2023
Hemp (Cannabis spp.) is a rich source of natural compounds and fiber for medicinal and industrial use. While fungal and bacterial pathogens of hemp are quite well characterized, virus infections have been reported and seen as an emerging threat for hemp cultivation only in recent years.
Miotti, Niccolo, Sukhikh, Natalia, Laboureau, Nathalie, Casati, Paola, Pooggin, Mikhail   +4 more
openaire   +1 more source

The Intra-Dependence of Viruses and the Holobiont. [PDF]

, 2017
Animals live in symbiosis with the microorganisms surrounding them. This symbiosis is necessary for animal health, as a symbiotic breakdown can lead to a disease state.
Grasis, Juris A
core  

Changes in the composition of the RNA virome mark evolutionary transitions in green plants

BMC Biology, 2016
The known plant viruses mostly infect angiosperm hosts and have RNA or small DNA genomes. The only other lineage of green plants with a relatively well-studied virome, unicellular chlorophyte algae, is mostly infected by viruses with large DNA genomes ...
A. Mushegian, A. Shipunov, S. Elena
semanticscholar   +1 more source

Virome analysis of field-collected chilli samples reveals diverse viruses

Virology Journal
Background Chilli (Capsicum annuum L.), an important spice crop, is susceptible to diverse viral infections. Traditional detection methods including PCR and its variants had difficulty in identifying the complete spectrum of viruses, especially in mixed ...
Vamsidhar Reddy Netla, Shridhar Hiremath, Mantesh Muttappagol, H. D. Vinay Kumar, S. Koti Prasanna, T. L. Mohan Kumar, C. R. Jahir Basha, V. Venkataravanappa, K. S. Shankarappa, M. N. Maruthi, C. N. Lakshminarayana Reddy   +10 more
doaj   +1 more source

A single-stranded based library preparation method for virome characterization

Microbiome
Background The gut virome is an integral component of the gut microbiome, playing a crucial role in maintaining gut health. However, accurately depicting the entire gut virome is challenging due to the inherent diversity of genome types (dsDNA, ssDNA ...
Xichuan Zhai, Alex Gobbi, Witold Kot, Lukasz Krych, Dennis Sandris Nielsen, Ling Deng   +5 more
doaj   +1 more source

How the other half lives: CRISPR-Cas's influence on bacteriophages

, 2017
CRISPR-Cas is a genetic adaptive immune system unique to prokaryotic cells used to combat phage and plasmid threats. The host cell adapts by incorporating DNA sequences from invading phages or plasmids into its CRISPR locus as spacers.
AE Briner, AF Andersson, BR Levin, C Pourcel, CL Sun, D Bhaya, E Pennisi, E Scarpellini, EV Koonin, FS Berezovskaya, GW Tyson, H Deveau, H Deveau, I Yosef, IN Berezovsky, J He, J Iranzo, J Mahony, JF Heidelberg, JM Peters, JO Haerter, KD Seed, KL Maxwell, LA Marraffini, LM Childs, M Sebaihia, P Han, P Horvath, P Horvath, PD Hsu, R Barrangou, R Lillestøl, R Sorek, S Al-Attar, S Minot, W Jiang   +35 more
core   +1 more source

SMART-RNA-Metavirome: a practical RNA metavirome platform compatible with high-throughput sequencing of both short and long reads

Infectious Diseases of Poverty
Background The RNA virosphere's extensive diversity and its role in emerging infectious diseases underscore the importance of non-targeted sequencing for identifying unknown or rare pathogens, including co-infections.
Xiaohua Liu, Ziyao Li, Xiang Guo, Liu Ge, Minling Hu, Qing He, Xiaoqing Zhang, Ziqing Feng, Yuji Wang, Lingzhai Zhao, Shu Zeng, Wenwen Ren, Haiyang Chen, Chunmei Wang, Rangke Wu, Wei Zhao, Fuchun Zhang, Xiao-Guang Chen, Xiaohong Zhou   +18 more
doaj   +1 more source

Mining the virome for insights into type 1 diabetes [PDF]

, 2018
Park, Arnold, Zhao, Guoyan
core   +2 more sources