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Upstream binding factor-dependent and pre-rRNA transcription-independent association of pre-rRNA processing factors with rRNA gene

Biochemical and Biophysical Research Communications, 2014
The nucleolus is the ribosome biogenesis center. The nucleolar structure is disrupted upon entry into mitosis and is formed in early G1 phase. To understand the molecular mechanisms of nucleolar assembly and disassembly, we have studied the mechanism of association between factors involved in pre-ribosome RNA (rRNA) processing and rRNA gene chromatin ...
Shuhei, Ueshima   +2 more
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Gene heterogeneity: a basis for alternative 5.8S rRNA processing

Biochemistry, 1984
Two bands of 5.8S rRNA were observed when the total RNA isolated from rat or mouse tissue was separated by electrophoresis on high-resolution polyacrylamide gels under denaturing conditions. The minor form, with a lower mobility, represented 15-35% of the total 5.8S rRNA, depending on the source of the tissue.
S D, Smith, N, Banerjee, T O, Sitz
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Expression of mouse and frog rRNA genes: transcription and processing

Molecular and Cellular Biochemistry, 1991
This article summarizes a number of lines of investigation of rRNA gene expression that are ongoing in the laboratory. These studies focus on mouse and frog, two distant vertebrate species. One major conclusion is that the basic properties of rRNA gene expression appear remarkably well conserved in evolution, with only relatively minor perturbations ...
B, Sollner-Webb   +8 more
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Characterization of a crucifer plant pre-rRNA processing complex

Biochemical Society Transactions, 2004
In cruciferous plants, the primary pre-rRNA cleavage site (P site) is immediately downstream of four similar, highly conserved sequences (A1, A2, A3 and B) located within the 5′-ETS (5′-external transcribed spacer). In the present study, we describe the characterization of a plant NF D (nuclear factor D) that binds and interacts specifically with this ...
J, Sáez-Vasquez   +3 more
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Parallels in rRNA Processing:  Conserved Features in the Processing of the Internal Transcribed Spacer 1 in the Pre-rRNA from Schizosaccharomyces pombe

Biochemistry, 2005
Despite the large differences in their length and nucleotide composition, comparative analyses of the internal transcribed spacer 1 (ITS1) of widely divergent eukaryotes have suggested a simple core structure consisting of a central extended hairpin and lesser hairpin structures at the maturing junctions [Lalev, A. I., and Nazar, R. N. (1998) J.
Priyanka D, Abeyrathne, Ross N, Nazar
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Ribonuclease E Is Involved in the Processing of 5-S rRNA from a Number of rRNA Transcription Units

European Journal of Biochemistry, 1982
Strains of Escherichia coli having a thermosensitive RNase E produce a number of 5-S ribosomal RNA precursors at a non-permissive temperature. One of these precursors, 9-S RNA, was reported earlier [Ghora, B.K. and Apirion, D. (1978) Cell, 15, 1055-1066]. Here we show the existence of additional precursors to 5-S rRNA, originating from a number of rRNA
B K, Ray, B, Singh, M K, Roy, D, Apirion
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Quantitative Northern Blot Analysis of Mammalian rRNA Processing

2016
Assembly of eukaryotic ribosomes is an elaborate biosynthetic process that begins in the nucleolus and requires hundreds of cellular factors. Analysis of rRNA processing has been instrumental for studying the mechanisms of ribosome biogenesis and effects of stress conditions on the molecular milieu of the nucleolus.
Minshi, Wang, Dimitri G, Pestov
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Making Ribosomes: Pre-rRNA Transcription and Processing

2014
Ribosomes are essential, intricate cellular machines that translate mRNA into protein in all cells. The process of building a ribosome is highly complex. The ribosomal RNA (rRNA) has to be properly synthesized, processed, and assembled with ribosomal proteins in the cell nucleolus.
Kathleen L. McCann, Susan J. Baserga
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rRNA processing

Reactome - a curated knowledgebase of biological pathways, 2016
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