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mRNA and microRNA quality control for RT-qPCR analysis
Methods, 2010The importance of high quality sample material, i.e. non-degraded or fragmented RNA, for classical gene expression profiling is well documented. Hence, the analysis of RNA quality is a valuable tool in the preparation of methods like RT-qPCR and microarray analysis. For verification of RNA integrity, today the use of automated capillary electrophoresis
C, Becker +3 more
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TaqMan RT-qPCR for tRNA half quantification
When quantifying tRNA-derived short non-coding RNAs (sncRNAs), two key considerations must be addressed. First, sequencing analyses have revealed significant heterogeneity in the lengths and terminal sequences of tRNA-derived sncRNAs. Second, within the total RNA fraction, these sncRNAs coexist with more abundant mature tRNAs and their precursors (pre ...Megumi, Shigematsu +2 more
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Selection of Reliable Reference Genes for RT-qPCR Analysis
2014Reference genes have become the method of choice for normalization of qPCR data. It has been demonstrated in many studies that reference gene validation is essential to ensure accurate and reliable results. This chapter describes how a pilot study can be set up to identify the best set of reference genes to be used for normalization of qPCR data.
Jan, Hellemans, Jo, Vandesompele
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Stem-Loop RT-qPCR for MicroRNA Expression Profiling
2011Quantification of the microRNAs (miRNAs) in cells or tissues is a crucial step in understanding their biological functions. Development of the stem-loop reverse transcription procedure and TaqMan(®) miRNA assays enables accurate detection of miRNA expression levels by quantitative PCR.
James, Hurley +4 more
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Rare Transcripts Quantification by Strand-Specific RT-qPCR
B lymphocytes development is associated with significant immunoglobulin (Ig) gene recombination leading to the establishment of a highly diverse and specific Ig repertoire. Accessibility of Ig genes is tightly regulated and associated with the production of sterile transcripts (noncoding), including low abundant anti-sense (AS) transcripts.Ophélie Alyssa Martin +2 more
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COVID-19 Diagnosis: A Comprehensive Review of the RT-qPCR Method for Detection of SARS-CoV-2
Diagnostics, 2022Debashis Dutta +2 more
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