Results 21 to 30 of about 11,591,695 (294)
Prediction of RNA Secondary Structure [PDF]
Proceedings of the National Academy of Sciences, 1971 Calculations of the free energy required to close single-strand loops by formation of a base pair in double-helical nucleic acids are reported. These results can be used to estimate the free energy of particular secondary structures for a given RNA molecule under conditions of high-salt concentration.
C, Delisi, D M, Crothers
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RNA secondary structure prediction with pseudoknots: Contribution of algorithm versus energy model. [PDF]
PLoS ONE, 2018 RNA is a biopolymer with various applications inside the cell and in biotechnology. Structure of an RNA molecule mainly determines its function and is essential to guide nanostructure design.
Hosna Jabbari +2 more
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Limits of experimental evidence in RNA secondary structure prediction [PDF]
Frontiers in BioinformaticsSarah von Löhneysen +7 more
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Prediction of RNA Secondary Structure Including Kissing Hairpin Motifs [PDF]
, 2010 Theis C, Janssen S, Giegerich R. Prediction of RNA Secondary Structure Including Kissing Hairpin Motifs. In: Moulton V, Singh M, eds. Algorithms in Bioinformatics. 10th international workshop (WABI 2010), proceedings. Lecture Notes in Bioinformatics. Vol
Corinna Theis +7 more
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Molecules, 2012 Enzymatic proteolysis of food proteins is considered a promising method to generate antibacterial peptides. The objective of the present study was to isolate and characterize peptide fraction from the pepsin hydrolysate of half-fin anchovy (Setipinna ...
Dong-Feng Wang +3 more
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Viruses, 2019 The mechanism of prion strain diversity remains unsolved. Investigation of inheritance and diversification of protein-based pathogenic information demands the identification of the detailed structures of abnormal isoforms of the prion protein (PrPSc ...
Yuzuru Taguchi +2 more
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An extension of secondary structure prediction towards the prediction of tertiary structure [PDF]
FEBS Letters, 1991 Secondary structure prediction parameters and optimised decision constants for use with the method of Garnier et al. [(1978) J. Mol. Biol. 120, 97–120] have been derived for two new and distinct substates of β‐structure. These we term internal and external on the basis of their hydrogen bonding patterns.
Garratt, Richard C. +2 more
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Prediction of protein secondary structure content [PDF]
Protein Engineering, Design and Selection, 1999 All existing algorithms for predicting the content of protein secondary structure elements have been based on the conventional amino-acid-composition, where no sequence coupling effects are taken into account. In this article, an algorithm was developed for predicting the content of protein secondary structure elements that was based on a new amino ...
W, Liu, K C, Chou
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A comprehensive comparison of comparative RNA structure prediction approaches [PDF]
, 2004 Gardner PP, Giegerich R. A comprehensive comparison of comparative RNA structure prediction approaches. BMC Bioinformatics. 2004;5(1): 140.Background: An increasing number of researchers have released novel RNA structure analysis and prediction ...
Giegerich, R. +7 more
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Prediction of RNA Pseudoknotted Secondary Structure using Stochastic Context Free Grammars (SCFG)1
CLEI Electronic Journal, 2006 Pseudoknots are a frequent RNA structure that assumes essential roles for varied biocatalyst cell’s functions. One of the most challenging fields in bioinformatics is the prediction of this secondary structure based on the base-pair sequence that ...
Rafael García
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