Results 41 to 50 of about 1,311,103 (281)
Lower bounds on multiple sequence alignment using exact 3-way alignment
BMC Bioinformatics, 2007 Background Multiple sequence alignment is fundamental. Exponential growth in computation time appears to be inevitable when an optimal alignment is required for many sequences. Exact costs of optimum alignments are therefore rarely computed. Consequently
Colbourn Charles J, Kumar Sudhir
doaj +1 more source
Aligning two fragmented sequences [PDF]
Proceedings 16th International Parallel and Distributed Processing Symposium, 2002 zbMATH Open Web Interface contents unavailable due to conflicting licenses.
Vamsi Veeramachaneni +2 more
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Inverse parametric sequence alignment
Journal of Algorithms, 2002 Summary: We consider the inverse parametric sequence alignment problem, where a sequence alignment, called a reference alignment, is given and the task is to determine parameter values such that the reference alignment is optimal for those parameter values.
Fangting Sun +2 more
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Pediatric Blood &Cancer, EarlyView.ABSTRACT Immune effector cell‐associated hemophagocytic lymphohistiocytosis‐like syndrome (IEC‐HS) is a life‐threatening hyperinflammatory toxicity distinct from cytokine release syndrome (CRS) and neurotoxicity following chimeric antigen receptor T‐cell (CAR‐T) therapy. In a single‐institution retrospective cohort of pediatric and young adult patients
Thomas J. Galletta +6 more
wiley +1 more source
gpALIGNER: A Fast Algorithm for Global Pairwise Alignment of DNA Sequences [PDF]
Iranian Journal of Chemistry & Chemical Engineering, 2011 Bioinformatics, through the sequencing of the full genomes for many species, is increasingly relying on efficient global alignment tools exhibiting both high sensitivity and specificity.
Mostafa Hadian Dehkordi +2 more
doaj
Higher accuracy protein Multiple Sequence Alignment by Stochastic Algorithm [PDF]
, 2010 Multiple Sequence Alignment gives insight into evolutionary, structural and functional relationships among the proteins. Here, a novel Protein Alignment by Stochastic Algorithm (PASA) is developed.
Alpana Dey +4 more
core +1 more source
Bethe Ansatz in the Bernoulli Matching Model of Random Sequence Alignment
, 2008 For the Bernoulli Matching model of sequence alignment problem we apply the Bethe ansatz technique via an exact mapping to the 5--vertex model on a square lattice.
A. M. Vershik +14 more
core +3 more sources
Therapeutic Apheresis and Dialysis, EarlyView.ABSTRACT Introduction Patients requiring long‐term continuous renal replacement therapy (CRRT) generally have poor prognoses. This study evaluated whether adding continuous intravenous sodium infusion (cIVNa) is associated with improved hemodynamics and outcomes in patients undergoing long‐term CRRT for ≥ 7 days.
Akinori Yamaguchi +6 more
wiley +1 more source
PhAST : pharmacophore alignment search tool [PDF]
, 2009 We developed the Pharmacophore Alignment Search Tool (PhAST), a text-based technique for rapid hit and lead structure searching in large compound databases.
Hofmann, Bettina Petra +4 more
core
The effect of sequence quality on sequence alignment [PDF]
Bioinformatics, 2008 Abstract Motivation: The nucleotide sequencing process produces not only the sequence of nucleotides, but also associated quality values. Quality values provide valuable information, but are primarily used only for trimming sequences and generally ignored in subsequent analyses.
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