Results 11 to 20 of about 3,190,493 (303)
EPL (Europhysics Letters), 2016 We analyze the structure of the state space of chess by means of transition path sampling Monte Carlo simulation. Based on the typical number of moves required to transpose a given configuration of chess pieces into another, we conclude that the state ...
Atashpendar, A. +2 more
core +5 more sources
Monitoring the microbiome for food safety and quality using deep shotgun sequencing
npj Science of Food, 2021 In this work, we hypothesized that shifts in the food microbiome can be used as an indicator of unexpected contaminants or environmental changes. To test this hypothesis, we sequenced the total RNA of 31 high protein powder (HPP) samples of poultry meal ...
Kristen L. Beck +21 more
doaj +1 more source
Mathematics, 2022 Given an n-element point set in the plane, in how many ways can it be peeled off until no point remains? Only one extreme point can be removed at a time. The answer obviously depends on the point set. If the points are in convex position, there are exactly n! ways, which is the maximum number of ways for n points. But what is the minimum number?
Adrian Dumitrescu, Géza Tóth
openaire +6 more sources
Epitachophoresis is a novel versatile total nucleic acid extraction method
Scientific Reports, 2021 Epitachophoresis is a novel next generation extraction system capable of isolating DNA and RNA simultaneously from clinically relevant samples. Here we build on the versatility of Epitachophoresis by extracting diverse nucleic acids ranging in lengths ...
Vladimira Datinska +8 more
doaj +1 more source
Truvari: refined structural variant comparison preserves allelic diversity
Genome Biology, 2022 The fundamental challenge of multi-sample structural variant (SV) analysis such as merging and benchmarking is identifying when two SVs are the same.
Adam C. English +4 more
doaj +1 more source
PCR biases distort bacterial and archaeal community structure in pyrosequencing datasets [PDF]
, 2012 As 16S rRNA gene targeted massively parallel sequencing has become a common tool for microbial diversity investigations, numerous advances have been made to minimize the influence of sequencing and chimeric PCR artifacts through rigorous quality control ...
Ameet J. Pinto +2 more
core +10 more sources
Frontiers in Microbiology, 2023 In Phi29-α–hemolysin (α-HL) nanopore sequencing systems, a strong electrochemical signal is dependent on a high concentration of salt. However, high salt concentrations adversely affect polymerase activity.
Yaping Sun +10 more
doaj +1 more source
Sequencing technologies and genome sequencing [PDF]
Journal of Applied Genetics, 2011 The high-throughput - next generation sequencing (HT-NGS) technologies are currently the hottest topic in the field of human and animals genomics researches, which can produce over 100 times more data compared to the most sophisticated capillary sequencers based on the Sanger method.
Pareek, Chandra Shekhar +2 more
openaire +3 more sources
Unusual sequence characteristics of human chromosome 19 are conserved across 11 nonhuman primates
BMC Evolutionary Biology, 2020 Background Human chromosome 19 has many unique characteristics including gene density more than double the genome-wide average and 20 large tandemly clustered gene families.
R. Alan Harris +3 more
doaj +1 more source
PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation
Genome Biology, 2021 Long-read sequencing has been shown to have advantages in structural variation (SV) detection and methylation calling. Many studies focus either on SV, methylation, or phasing of SNV; however, only the combination of variants provides a comprehensive ...
Medhat Mahmoud +3 more
doaj +1 more source