Results 31 to 40 of about 2,613,419 (309)
Scientific Reports, 2017 Single molecule sequencing (SMS) platforms enable base sequences to be read directly from individual strands of DNA in real-time. Though capable of long read lengths, SMS platforms currently suffer from low throughput compared to competing short-read ...
Ulrich Schlecht +3 more
doaj +1 more source
PIMS sequencing extension:a laboratory information management system for DNA sequencing facilities [PDF]
, 2011 Background: Facilities that provide a service for DNA sequencing typically support large numbers of users and experiment types. The cost of services is often reduced by the use of liquid handling robots but the efficiency of such facilities is hampered ...
McPherson, MJ +18 more
core +1 more source
Sparse Sequence-to-Sequence Models [PDF]
Proceedings of the 57th Annual Meeting of the Association for Computational Linguistics, 2019 Sequence-to-sequence models are a powerful workhorse of NLP. Most variants employ a softmax transformation in both their attention mechanism and output layer, leading to dense alignments and strictly positive output probabilities. This density is wasteful, making models less interpretable and assigning probability mass to many implausible outputs.
Ben Peters +2 more
openaire +3 more sources
SEQUENCER: Sequence-to-Sequence Learning for End-to-End Program Repair [PDF]
IEEE Transactions on Software Engineering, 2021 21 pages, 15 ...
Zimin Chen +5 more
openaire +3 more sources
Special features of RAD Sequencing data:implications for genotyping [PDF]
, 2012 Restriction site-associated DNA Sequencing (RAD-Seq) is an economical and efficient method for SNP discovery and genotyping. As with other sequencing-by-synthesis methods, RAD-Seq produces stochastic count data and requires sensitive analysis to develop ...
Fuentes-Utrilla, Pablo +12 more
core +1 more source
Sequence to Sequence -- Video to Text [PDF]
2015 IEEE International Conference on Computer Vision (ICCV), 2015 ICCV 2015 camera-ready.
Subhashini Venugopalan +5 more
openaire +2 more sources
SVhound: detection of regions that harbor yet undetected structural variation
BMC Bioinformatics, 2023 Background Recent population studies are ever growing in number of samples to investigate the diversity of a population or species. These studies reveal new polymorphism that lead to important insights into the mechanisms of evolution, but are also ...
Luis F. Paulin +5 more
doaj +1 more source
Frontiers in Molecular Biosciences, 2022 Background and Objective: One of the most recent forms of programmed cell death, ferroptosis, is crucial in tumorigenesis. Ferroptosis is characterized by iron-dependent oxidative destruction of cellular membranes following the antioxidant system’s ...
Salem Baldi +11 more
doaj +1 more source
Geoseq: a tool for dissecting deep-sequencing datasets [PDF]
, 2010 Gurtowski J, Cancio A, Shah H, et al. Geoseq: a tool for dissecting deep-sequencing datasets. BMC Bioinformatics. 2010;11(1): 506.Background Datasets generated on deep-sequencing platforms have been deposited in various public repositories such as the ...
Robert Homann +13 more
core +1 more source
High-throughput Quant-iT PicoGreen assay using an automated liquid handling system
BioTechniques, 2019 Workflows in NGS facilities require high-standard practices and high-throughput pipelines to process the large number of samples received in a timely manner. Downstream protocols such as NGS library preparation require accurate estimation of nucleic acid
Kay Anantanawat +3 more
doaj +1 more source