Results 1 to 10 of about 1,046,650 (341)

Development and Application of a Target Capture Sequencing SNP-Genotyping Platform in Rice [PDF]

Genes, 2022
The development of efficient, robust, and high-throughput SNP genotyping platforms is pivotal for crop genetics and breeding. Recently, SNP genotyping platforms based on target capture sequencing, which is very flexible in terms of the number of SNP ...
Hyoja Oh, Young-Min Jeong, Jeongho Baek   +2 more
exaly   +3 more sources

Detecting SARS-CoV-2 variants with SNP genotyping. [PDF]

PLoS ONE, 2021
Tracking genetic variations from positive SARS-CoV-2 samples yields crucial information about the number of variants circulating in an outbreak and the possible lines of transmission but sequencing every positive SARS-CoV-2 sample would be prohibitively ...
Helen Harper, Amanda Burridge, Mark Winfield, Adam Finn, Andrew Davidson, David Matthews, Stephanie Hutchings, Barry Vipond, Nisha Jain, COVID-19 Genomics UK (COG-UK) Consortium, Keith Edwards, Gary Barker   +11 more
doaj   +3 more sources

A multisite SNP genotyping and macrolide susceptibility gene method for Mycoplasma pneumoniae based on MALDI-TOF MS

iScience, 2021
Summary: In this study, a multisite SNP genotyping and macrolide (ML) susceptibility gene test method for Mycoplasma pneumoniae (M. pneumoniae) was developed based on matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF
Fei Zhao, Jianzhong Zhang, Xuemei Wang, Liyong Liu, Jie Gong, Zhixiang Zhai, Lihua He, Fanliang Meng, Di Xiao   +8 more
doaj   +2 more sources

Modified "Allele-Specific qPCR" Method for SNP Genotyping Based on FRET. [PDF]

Front Plant Sci, 2021
The proposed method is a modified and improved version of the existing “Allele-specific q-PCR” (ASQ) method for genotyping of single nucleotide polymorphism (SNP) based on fluorescence resonance energy transfer (FRET).
Kalendar R, Baidyussen A, Serikbay D, Zotova L, Khassanova G, Kuzbakova M, Jatayev S, Hu YG, Schramm C, Anderson PA, Jenkins CLD, Soole KL, Shavrukov Y.   +12 more
europepmc   +2 more sources

Development of a Next Generation SNP Genotyping Array for Wheat

bioRxiv, 2023
High throughput genotyping arrays have provided a cost effective, reliable and interoperable system for genotyping hexaploid wheat and its related germplasm pool.
Burridge AJ, Winfield M, Przewieslik-Allen A, Edwards KJ, Siddique I, Barral-Arca R, Griffiths S, Cheng S, Huang Z, Feng C, Dreisigacker S, Bentley AR, Brown-Guedira G, Barker GL.   +13 more
europepmc   +2 more sources

Comparison of TaqMan, KASP and rhAmp SNP genotyping platforms in hexaploid wheat.

PLoS ONE, 2019
Advances in high-throughput genotyping enable the generation of genome-scale data much more easily and at lower cost than ever before. However, small-scale and cost-effective high-throughput single-nucleotide polymorphism (SNP) genotyping technologies ...
Habtamu Ayalew, Pak Wah Tsang, Chenggen Chu, Junzhou Wang, Shuyu Liu, Caifu Chen, Xue-Feng Ma   +6 more
doaj   +2 more sources

Pooled DNA genotyping on Affymetrix SNP genotyping arrays [PDF]

BMC Genomics, 2006
Background Genotyping technology has advanced such that genome-wide association studies of complex diseases based upon dense marker maps are now technically feasible. However, the cost of such projects remains high.
Owen Michael J, Moskvina Valentina, Georgieva Lyudmila, Nikolov Ivan, Kirov George, O'Donovan Michael C   +5 more
doaj   +3 more sources

Universal probe-based intermediate primer-triggered qPCR (UPIP-qPCR) for SNP genotyping [PDF]

BMC Genomics, 2021
Background The detection and identification of single nucleotide polymorphism (SNP) is essential for determining patient disease susceptibility and the delivery of medicines targeted to the individual.
Baowei Li, Yanran Liu, Xiaodan Hao, Jinhua Dong, Limei Chen, Haimei Li, Wei Wu, Ying Liu, Jianxun Wang, Yin Wang, Peifeng Li   +10 more
doaj   +2 more sources

Parentage Atlas of Italian Grapevine Varieties as Inferred From SNP Genotyping. [PDF]

Front Plant Sci, 2020
The Italian grape germplasm is characterized by a high level of richness in terms of varieties number, with nearly 600 wine grape varieties listed in the Italian National Register of Grapevine Varieties and with a plethora of autochthonous grapes. In the
D'Onofrio C, Tumino G, Gardiman M, Crespan M, Bignami C, de Palma L, Barbagallo MG, Muganu M, Morcia C, Novello V, Schneider A, Terzi V.   +11 more
europepmc   +2 more sources

An Axiom SNP genotyping array for Douglas-fir. [PDF]

BMC Genomics, 2020
In forest trees, genetic markers have been used to understand the genetic architecture of natural populations, identify quantitative trait loci, infer gene function, and enhance tree breeding.
Howe GT, Jayawickrama K, Kolpak SE, Kling J, Trappe M, Hipkins V, Ye T, Guida S, Cronn R, Cushman SA, McEvoy S.   +10 more
europepmc   +2 more sources