Results 1 to 10 of about 219,632 (346)
SNPPicker: High quality tag SNP selection across multiple populations
BMC Bioinformatics, 2011 Background Linkage Disequilibrium (LD) bin-tagging algorithms identify a reduced set of tag SNPs that can capture the genetic variation in a population without genotyping every single SNP.
Dhiman Neelam +4 more
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Associations of clock genes polymorphisms with soft tissue sarcoma susceptibility and prognosis [PDF]
, 2018 BACKGROUND: Dysfunction of the circadian clock and polymorphisms of some circadian genes have been linked to cancer development and progression. We investigated the relationship between circadian genes germline variation and susceptibility or prognosis ...
Benna, Clara +6 more
core +2 more sources
Arquivos de Gastroenterologia, 2012 CONTEXT: Genotyping of single nucleotide polymorphism (SNP C/T-13910) located upstream of the lactase gene is used to determine adult-type hypolactasia/lactase persistence in North-European Caucasian subjects.
Evelyn Mendoza Torres +3 more
doaj +1 more source
Polymorphisms in FTO, TMEM18 and PCSK1 are associated with BMI in southern Chinese population [PDF]
, 2014 The article discusses a study which aimed to examine the association between body mass index and several genes, including FTO, TMEM18 and PCSK1, by genotyping the previously reported 11 single-nucleotide polymorphism (SNP) in southern Chinese.
Chen, J +4 more
core +1 more source
Silhouette scores for assessment of SNP genotype clusters
BMC Genomics, 2005 Background High-throughput genotyping of single nucleotide polymorphisms (SNPs) generates large amounts of data. In many SNP genotyping assays, the genotype assignment is based on scatter plots of signals corresponding to the two SNP alleles. In a robust
Jonsson Mats +3 more
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Genome resequencing reveals multiscale geographic structure and extensive linkage disequilibrium in the forest tree Populus trichocarpa [PDF]
, 2009 This is the publisher’s final pdf. The article is copyrighted by the New Phytologist Trust and published by John Wiley & Sons, Inc. It can be found at: http://onlinelibrary.wiley.com/journal/10.1111/%28ISSN%291469-8137.
Slavov, Gancho Trifonu +25 more
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SNP GENOTYPING IN TETRAPLOID CUT ROSES
Acta Horticulturae, 2012 Genetic analysis in tetraploid rose is complex: inheritance of genes could be disomic, keeping the two original diploid genomes separate but it could also be tetrasomic, permitting the four homologous chromosomes to pair and recombine during meiosis, and including the possibility of double reduction.
Koning-Boucoiran, C.F.S. +4 more
openaire +2 more sources
The Invader® assay for SNP genotyping [PDF]
Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis, 2005 The Invader assay uses a structure-specific flap endonuclease (FEN) to cleave a three-dimensional complex formed by hybridization of allele-specific overlapping oligonucleotides to target DNA containing a single nucleotide polymorphism (SNP) site. Annealing of the oligonucleotide complementary to the SNP allele in the target molecule triggers the ...
openaire +2 more sources
Genotyping by multiplexed sequencing (GMS): A customizable platform for genomic selection.
PLoS ONE, 2020 As genotyping technologies continue to evolve, so have their throughput and multiplexing capabilities. In this study, we demonstrate a new PCR-based genotyping technology that multiplexes thousands of single nucleotide polymorphism (SNP) markers with ...
Travis M Ruff +6 more
doaj +1 more source
Improving sequence-based genotype calls with linkage disequilibrium and pedigree information
, 2012 Whole and targeted sequencing of human genomes is a promising, increasingly feasible tool for discovering genetic contributions to risk of complex diseases.
Whittemore, Alice S., Zhou, Baiyu
core +1 more source