Results 41 to 50 of about 312,877 (298)
TROLL—Tandem Repeat Occurrence Locator [PDF]
Bioinformatics, 2002 Abstract Summary: Tandem Repeat Occurrence Locator (TROLL), is a light-weight Simple Sequence Repeat (SSR) finder based on a slight modification of the Aho–Corasick algorithm. It is fast and only requires a standard Personal Computer (PC) to operate.
Adalberto T, Castelo +2 more
openaire +2 more sources
Evolution and control of imprinted FWA genes in the genus Arabidopsis. [PDF]
PLoS Genetics, 2008 A central question in genomic imprinting is how a specific sequence is recognized as the target for epigenetic marking. In both mammals and plants, imprinted genes are often associated with tandem repeats and transposon-related sequences, but the role of
Ryo Fujimoto +9 more
doaj +1 more source
FISH mapping and molecular organization of the major repetitive sequences of tomato [PDF]
, 2008 This paper presents a bird's-eye view of the major repeats and chromatin types of tomato. Using fluorescence in-situ hybridization (FISH) with Cot-1, Cot-10 and Cot-100 DNA as probes we mapped repetitive sequences of different complexity on pachytene ...
Chang, S.B. +10 more
core +2 more sources
, 2006 Vibrio cholerae O1 isolates belonging to the Ogawa serotype, El Tor biotype, harbouring the classical CTX prophage were first isolated in Mozambique in 2004.
Ansaruzzaman, M +13 more
core +1 more source
Dissecting and reprogramming the folding and assembly of tandem-repeat proteins. [PDF]
, 2015 Studying protein folding and protein design in globular proteins presents significant challenges because of the two related features, topological complexity and co-operativity.
Itzhaki, Laura S +4 more
core +2 more sources
RNA biology of disease-associated microsatellite repeat expansions
Acta Neuropathologica Communications, 2017 Microsatellites, or simple tandem repeat sequences, occur naturally in the human genome and have important roles in genome evolution and function. However, the expansion of microsatellites is associated with over two dozen neurological diseases. A common
Kushal J. Rohilla, Keith T. Gagnon
doaj +1 more source
DRD4-exonIII-VNTR moderates the effect of childhood adversities on emotional resilience in young-adults [PDF]
, 2015 Most individuals successfully maintain psychological well-being even when exposed to trauma or adversity. Emotional resilience or the ability to thrive in the face of adversity is determined by complex interactions between genetic makeup, previous ...
Anstey, Kaarin +4 more
core +1 more source
PLoS ONE, 2014 The circumsporozoite protein (CSP) is the major surface protein of the sporozoite stage of malaria parasites and has multiple functions as the parasite develops and then migrates from the mosquito midgut to the mammalian liver.
David J P Ferguson +10 more
doaj +1 more source
Profiling variable-number tandem repeat variation across populations using repeat-pangenome graphs
Nature Communications, 2021 Variable number tandem repeats (VNTRs) are difficult to analyze by short-read sequencing in disease studies. Here, the authors describe a VNTR mapping strategy for short-read analyses using a repeat pangenome graph.
Tsung-Yu Lu +2 more
doaj +1 more source
Contractions of the C-Terminal Domain of Saccharomyces cerevisiae Rpb1p Are Mediated by Rad5p
G3: Genes, Genomes, Genetics, 2020 The C-terminal domain (CTD) is an essential domain of the largest subunit of RNA polymerase II, Rpb1p, and is composed of 26 tandem repeats of a seven-amino acid sequence, YSPTSPS.
Taylor Stewart +3 more
doaj +1 more source