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The molecular organization of the lysostaphin gene and its sequences repeated in tandem

Molecular and General Genetics MGG, 1987
The gene encoding lysostaphin of Staphylococcus staphylolyticus was cloned in Escherichia coli and its DNA sequence was determined. The complete coding region comprises 1440 base pairs corresponding to a precursor of 480 amino acids (molecular weight 51 669).
P, Heinrich   +4 more
openaire   +2 more sources

Detection of Tandem Repeats in DNA Sequences Based on Parametric Spectral Estimation

IEEE Transactions on Information Technology in Biomedicine, 2009
Tandem repeats, which occur frequently in genomes, are related to gene regulatory functions and various diseases. In this paper, an efficient algorithm for tandem repeat detection is proposed. In our method, the spectrogram of a DNA sequence is analyzed based on the autoregressive model.
Hongxia Zhou, Liping Du, Hong Yan 0001
openaire   +2 more sources

Locating all tandem repeat families in a sequence

Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004. CSB 2004., 2004
Donald A. Adjeroh, Jianan Feng
openaire   +1 more source

MASTR-seq: Multiplexed Analysis of Short Tandem Repeats with sequencing

Abstract More than 60 human disorders have been linked to unstable expansion of short tandem repeat (STR) tracts. STR length and the extent of DNA methylation is linked to disease pathology and can be mosaic in a cell type-specific manner in several repeat expansion disorders.
Chuanbin Su   +6 more
openaire   +2 more sources

RPTRF: A rapid perfect tandem repeat finder tool for DNA sequences

BioSystems, 2023
Mahmoud Naghibzadeh   +1 more
exaly  

Sequence Analysis of Tandem Repeats Utilizing 3rd Generation Sequencing Technologies

Tandem repeats (TRs)—short DNA motifs repeated consecutively—are a highly variable variant class that make up 3-8% of the human genome. Once thought of as “junk DNA,” these repetitive elements have now been implicated in over 50 neurodegenerative disorders including Huntington’s disease and ALS.
openaire   +1 more source

Tandem repeat disorders

Evolution, Medicine and Public Health, 2019
Calen Ryan
exaly  

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