Results 21 to 30 of about 397,005 (298)

Comparative Geometrical Analysis of Leucine-Rich Repeat Structures in the Nod-Like and Toll-Like Receptors in Vertebrate Innate Immunity

open access: yesBiomolecules, 2015
The NOD-like receptors (NLRs) and Toll-like receptors (TLRs) are pattern recognition receptors that are involved in the innate, pathogen pattern recognition system.
Norio Matsushima   +3 more
doaj   +1 more source

ProRepeat: an integrated repository for studying amino acid tandem repeats in proteins [PDF]

open access: yes, 2011
ProRepeat (http://prorepeat.bioinformatics.nl/) is an integrated curated repository and analysis platform for in-depth research on the biological characteristics of amino acid tandem repeats.
Harm Nijveen   +14 more
core   +1 more source

Insight into role of selection in the evolution of polyglutamine tracts in humans. [PDF]

open access: yesPLoS ONE, 2012
Glutamine tandem repeats are common in eukaryotic proteins. Although some studies have proposed that replication slippage plays an important role in shaping these repeats, the role of natural selection in glutamine tandem repeat evolution is somewhat ...
Hongwei Li   +3 more
doaj   +1 more source

Intragenic tandem repeats in Daphnia magna: structure, function and distribution [PDF]

open access: yes, 2009
Background Expressed sequence tag (EST) databases provide a valuable source of genetic data in organisms whose genome sequence information is not yet compiled.
Ebert, Dieter   +8 more
core   +1 more source

Unique Features of Tandem Repeats in Bacteria [PDF]

open access: yesJournal of Bacteriology, 2020
We found an enigmatic group of noncoding satellites in 85 bacterial genomes with a constant repeat size but variable sequence. This pattern of DNA organization is unique and had not been previously described in bacteria. These findings strongly suggest that satellite size in some bacteria is under strong selective constraints and thus that satellites ...
Subirana Torrent, Juan A.   +1 more
openaire   +4 more sources

Linear time algorithms for finding and representing all the tandem repeats in a string [PDF]

open access: yes, 2004
Gusfield D, Stoye J. Linear time algorithms for finding and representing all the tandem repeats in a string. Journal of computer and system sciences. 2004;69(4):525-546.A tandem repeat (or square) is a string [alpha][alpha], where [alpha] is a non-empty ...
Stoye, Jens   +2 more
core   +1 more source

NanoSatellite: accurate characterization of expanded tandem repeat length and sequence through whole genome long-read sequencing on PromethION

open access: yesGenome Biology, 2019
Technological limitations have hindered the large-scale genetic investigation of tandem repeats in disease. We show that long-read sequencing with a single Oxford Nanopore Technologies PromethION flow cell per individual achieves 30× human genome ...
Arne De Roeck   +10 more
doaj   +1 more source

Double String Tandem Repeats [PDF]

open access: yes, 2020
A tandem repeat is an occurrence of two adjacent identical substrings. In this paper, we introduce the notion of a double string, which consists of two parallel strings, and we study the problem of locating all tandem repeats in a double string.
Amir, Amihood   +4 more
core   +1 more source

Simple and flexible detection of contiguous repeats using a suffix tree [PDF]

open access: yes, 2002
Stoye J, Gusfield D. Simple and flexible detection of contiguous repeats using a suffix tree. Theoretical Computer Science. 2002;270(1-2):843-856.We study the problem of detecting all occurrences of (primitive) tandem repeats and tandem arrays in a ...
Jens Stoye   +4 more
core   +1 more source

Specific tandem repeats are sufficient for paramutation-induced trans-generational silencing. [PDF]

open access: yesPLoS Genetics, 2013
Paramutation is a well-studied epigenetic phenomenon in which trans communication between two different alleles leads to meiotically heritable transcriptional silencing of one of the alleles.
Christiane L Belele   +5 more
doaj   +1 more source

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