Results 221 to 230 of about 3,246,752 (251)

A three-dimensional shear dependent continuum model of platelet aggregation under flow. [PDF]

open access: yesPLoS Comput Biol
Montgomery D   +6 more
europepmc   +1 more source

Molecular dynamics simulations of human α-thrombin in different structural contexts: evidence for an aptamer-guided cooperation between the two exosites

open access: yesJournal of Biomolecular Structure and Dynamics, 2021
Human α-thrombin (thrombin) is a multifunctional enzyme that plays a pivotal role in the coagulation pathway. Thrombin activity can be effectively modulated by G-quadruplex-based oligonucleotide aptamers that specifically interact with the two positively
Nicole Balasco   +2 more
exaly   +2 more sources
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Thrombin - A Molecular Dynamics Perspective

Mini-Reviews in Medicinal Chemistry
Abstract: Thrombin is a crucial enzyme involved in blood coagulation, essential for maintaining circulatory system integrity and preventing excessive bleeding. However, thrombin is also implicated in pathological conditions such as thrombosis and cancer.
Freddie R Salsbury, Jiajie Xiao
exaly   +3 more sources

Thrombin allosteric modulation revisited: a molecular dynamics study

Journal of Molecular Modeling, 2009
The regulatory properties of thrombin are derived predominantly from its capacity to produce different functional conformations. Functional studies have revealed that two antagonistic thrombin conformations exist in equilibrium: the fast (procoagulant) and slow (anticoagulant) forms.
Hermes Luís Neubauer de Amorim   +2 more
exaly   +3 more sources

The influence of the concentration of thrombin on the dynamic viscoelasticity of clotting blood and fibrinogen-thrombin systems

Biorheology, 1971
Measurements of dynamic elastic modulus E ′ and loss modulus E ″ of clotting blood and fibrinogen solutions were carried out. When the blood is collected into a siliconized polyethylene test tube, the saturated value of E ′ is smaller and that of E ″ is larger, and the clotting time is longer than those when the blood is collected into a non ...
M, Kaibara, E, Fukada
openaire   +2 more sources

Investigation of interaction of thrombin-binding aptamer with thrombin and prethrombin-2 by simulation of molecular dynamics

Biophysics, 2013
Thrombin is a major component of blood clotting and involved in the formation of a fibrin clot. One of the precursors during thrombin maturation is prethrombin-2, with the presence of Arg363-Ile364 bond between the light and heavy chain of protein, the only distinction from thrombin.
Alexander Veselovsky
exaly   +4 more sources

Dynamic Changes in Thrombin Generation in Abdominal Sepsis in Mice

Shock, 2014
Systemic inflammatory response syndrome and severe infections are associated with major derangements in the coagulation system. The purpose of this study was to examine the dynamic alterations in thrombin generation in abdominal sepsis. Abdominal sepsis was induced by cecal ligation and puncture (CLP) in C57/Bl6 mice. Cecal ligation and puncture caused
Yongzhi, Wang   +5 more
openaire   +2 more sources

Dynamics of clot growth induced by thrombin diffusing into nonstirred citrate human plasma

Biochimica Et Biophysica Acta - General Subjects, 1998
The dynamics of clot formation was studied in a two-compartment chamber designed to allow free diffusion of thrombin according to its concentration gradient into nonstirred citrate plasma or fibrinogen solution. Fibrin clots in fibrinogen solutions increased progressively until the substrate was depleted.
Elena Sinauridze, F I Ataullakhanov
exaly   +3 more sources

Molecular dynamics simulations of thrombin inhibitors at the S' subsites of thrombin.

Drug design and discovery, 1994
Molecular dynamics were carried out to simulate binding interactions between S' subsites of thrombin and hirudin-based thrombin inhibitors. These inhibitors include three segments: an active-site segment, N alpha-acetyl-(D-Phe)-Pro-Arg-Pro-; a fibrinogen-recognition exo-site segment, hirudin 55-65; and a 13-atom-long linker.
Yue, S. Y., Konishi, Y.
openaire   +2 more sources

The effect of thrombin on the dynamic exchange between intraplatelet and extraplatelet fibrinogen

British Journal of Haematology, 1997
We examined the distribution of platelet fibrinogen and the exchange between intra‐ and extra‐platelet fibrinogen in unstimulated and thrombin‐stimulated platelets. In unstimulated platelets 60% of platelet fibrinogen was found in the soluble platelet fraction and 40% in the insoluble one. In platelets activated with thrombin, changes took place in the
V, Vila   +3 more
openaire   +2 more sources

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