HySE: A Force‐Directed Layout Algorithm for Directed and Mixed Graphs
We present HySE, a novel graph layout algorithm for mixed graphs combining directed and undirected components. Using a holistic spring embedder approach, HySE unifies hierarchical and force‐directed aesthetics, supports non‐uniform node sizes, and performs comparably to state‐of‐the‐art algorithms.
Ugur Dogrusoz, Hamza Islam, Hasan Balci
wiley +1 more source
amyloid-predict and LLPS-predict: Predicting phase separation propensities in the intrinsically disordered proteome. [PDF]
Lobo S, Griem L, Shell MS, Shea JE.
europepmc +1 more source
This meta‐analysis demonstrates high diagnostic accuracy of computer‐assisted methods in pancreatic EUS‐FNA cytology (AUC 0.92–0.96) and supports an integrated, cytopathologist‐led workflow in which artificial intelligence functions as an adjunct to diagnostic interpretation and on‐site evaluation (ROSE). Created in BioRender. Mohamed Mirzan, A. (2026)
Al‐Amaan Mohamed Mirzan, Roberto Dina
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High-throughput Mutational Surveillance of the SARS-CoV-2 Spike Gene
Özkan E +22 more
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The aesthetic sublime of megaproject structures: A framework and a research agenda
Abstract The physical structures of megaprojects—such as mega‐canals, metros, railway lines, bridges, tunnels, and iconic opera houses—hold a profound capacity to generate aesthetic experiences with enduring societal impact. Yet, research on megaprojects has predominantly focused on functionality and economic rationale with aesthetics being pushed to ...
Federica De Molli +2 more
wiley +1 more source
Conserved dimerization architecture in C‐type lectins from virus‐vector mosquitoes
C‐type lectins (CTLs) are involved in the detection of viral/microbial carbohydrates. We studied a family of soluble CTLs in the mosquito Aedes aegypti, which acts as a vector for viruses like dengue and Zika. Using crystallography, biophysics, and structure prediction approaches, we found that these proteins consistently pair together in the same ...
Mattia Bertinelli +6 more
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Trends and Techniques in 3D Reconstruction and Rendering: A Survey with Emphasis on Gaussian Splatting. [PDF]
Chen W, Li Z, Guo J, Zheng C, Tian S.
europepmc +1 more source
Reconnaissance‐Scale Methods for the Identification of Groundwater Discharge to Streams
Abstract Identifying groundwater discharge locations is critical for understanding and monitoring groundwater contributions to streams in terms of water quantity and quality. Streams and rivers are under increasing strain from factors, including increased urbanization, agricultural land use, groundwater extraction, and climate change, which can alter ...
Corey M. Zanatta +2 more
wiley +1 more source
Scaling and self-similarity in the formation of the embryonic epigenome. [PDF]
Olmeda F +9 more
europepmc +1 more source
Modular training resources for bioimage analysis
Abstract Modern microscopy enables us to measure structural and dynamical properties of many biological processes and is therefore an indispensable research tool. However, the amount and complexity of the produced imaging data is steadily increasing.
Christian Tischer +17 more
wiley +1 more source

