Results 11 to 20 of about 2,884 (146)

UTMOST, a single and cross-tissue TWAS (Transcriptome Wide Association Study), reveals new ASD (Autism Spectrum Disorder) associated genes [PDF]

open access: yesTranslational Psychiatry, 2021
Abstract Autism spectrum disorders (ASD) is a complex neurodevelopmental disorder that may significantly impact on the affected individual’s life. Common variation (SNPs) could explain about 50% of ASD heritability.
Cristina Rodriguez-Fontenla   +1 more
openaire   +4 more sources

Genome- and Transcriptome-Wide Association Studies Identify Susceptibility Genes and Pathways for Periodontitis

open access: yesCells, 2022
Several genes associated with periodontitis have been identified through genome-wide association studies (GWAS); however, known genes only explain a minority of the estimated heritability.
Guirong Zhu   +4 more
doaj   +1 more source

TWAS Atlas: a curated knowledgebase of transcriptome-wide association studies

open access: yesNucleic Acids Research, 2022
Abstract Transcriptome-wide association studies (TWASs), as a practical and prevalent approach for detecting the associations between genetically regulated genes and traits, are now leading to a better understanding of the complex mechanisms of genetic variants in regulating various diseases and traits.
Mingming Lu   +19 more
openaire   +2 more sources

Methyl-TWAS: A Powerful Method for In Silico Transcriptome-wide Association Studies (TWAS) Using Long-range DNA Methylation

open access: yesB16. NOVEL INSIGHTS INTO ASTHMA PATHOGENESIS, 2023
ABSTRACT In silico transcriptome-wide association studies (TWAS) are commonly used to test whether expression of specific genes is linked to a complex trait. However, genotype-based in silico TWAS such as PrediXcan, exhibit low prediction accuracy for a majority of
Soyeon Kim   +7 more
openaire   +2 more sources

A large-scale transcriptome-wide association study (TWAS) of ten blood cell phenotypes reveals complexities of TWAS fine-mapping [PDF]

open access: yes, 2021
Abstract Hematological measures are important intermediate clinical phenotypes for many acute and chronic diseases. Hematological measures are highly heritable, and although genome-wide association studies (GWAS) have identified thousands of loci containing trait-associated variants, the causal genes underlying these ...
Amanda L Tapia   +18 more
openaire   +1 more source

Transcriptome-wide association study identified candidate genes associated with gut microbiota

open access: yesGut Pathogens, 2021
Background Gut microbiota is closely associated with host health and disease occurrence. Host genetic factor plays an important role in shaping gut microbial communities.
Chuyu Pan   +12 more
doaj   +1 more source

Transcriptome-wide association studies: recent advances in methods, applications and available databases

open access: yesCommunications Biology, 2023
Genome-wide association study has identified fruitful variants impacting heritable traits. Nevertheless, identifying critical genes underlying those significant variants has been a great task.
Jialin Mai   +4 more
doaj   +1 more source

Dissecting the genetic heterogeneity of gastric cancerResearch in context

open access: yesEBioMedicine, 2023
Summary: Background: Gastric cancer (GC) is clinically heterogenous according to location (cardia/non-cardia) and histopathology (diffuse/intestinal). We aimed to characterize the genetic risk architecture of GC according to its subtypes.
Timo Hess   +133 more
doaj   +1 more source

Brain transcriptome wide association study (TWAS) implicates 8 genes across 6 loci in Alzheimer’s disease [PDF]

open access: yesAlzheimer's & Dementia, 2020
AbstractBackgroundAlzheimer’s disease (AD), an incurable neurodegenerative disease, currently affects 1.75% of the United States population, with projected growth to 3.46% by 2050. Common genetic variation linked transcript expression differences which confer AD‐risk isl necessary to elucidate AD mechanism and develop therapeutic interventions.
Jake Gockley   +9 more
openaire   +1 more source

Population-Matched Transcriptome Prediction Increases TWAS Discovery and Replication Rate

open access: yesiScience, 2020
Summary: Most genome-wide association studies (GWAS) and transcriptome-wide association studies (TWAS) focus on European populations; however, these results cannot always be accurately applied to non-European populations due to genetic architecture ...
Elyse Geoffroy   +2 more
doaj   +1 more source

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