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Volume electron microscopy reveals placental ultrastructure in 3D
Many structures necessary for placental function can only be visualised at the ultrastructural scale. Recent technological advances have made Volume electron microscopy (volume EM) approaches much more accessible. Volume EM allows the ultrastructure of tissues, cells and organelles to be visualised in 3D.
Rohan Lewis
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Author Correction: Volume electron microscopy
Nature Reviews Methods Primers, 2022In the version of this article initially published, the orientation of the bridge appearing below the dashed arrow in the “FIB- SEM/pFIB- SEM” section of Fig. 2 was incorrect, and article titles or journal listings for refs. 3, 42, 45, 155, 160, 175 and 197 were omitted.
Christopher J. Peddie +13 more
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Whole-cell organelle segmentation in volume electron microscopy
Nature, 2021Cells contain hundreds of organelles and macromolecular assemblies. Obtaining a complete understanding of their intricate organization requires the nanometre-level, three-dimensional reconstruction of whole cells, which is only feasible with robust and scalable automatic methods.
Larissa Heinrich +19 more
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Physical basics of scanning electron microscopy in volume electron microscopy
MicroscopyAbstract Volume electron microscopy (vEM) has become a widely adopted technique for acquiring three-dimensional structural information of biological specimens. In addition to the traditional use of transmission electron microscopy, recent advances in the resolution of scanning electron microscopy (SEM) made it suitable for vEM ...
Mitsuo, Suga, Yusuke, Hirabayashi
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Volume scanning electron microscopy for imaging biological ultrastructure
Biology of the Cell, 2016Electron microscopy (EM) has been a key imaging method to investigate biological ultrastructure for over six decades. In recent years, novel volume EM techniques have significantly advanced nanometre‐scale imaging of cells and tissues in three dimensions.
Benjamin Titze, Christel Genoud
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Serial block face-scanning electron microscopy for volume electron microscopy
2019There are different technologies that can be used to obtain a 3D image at nanometer resolution. Over the past decade, there has been a growing interest in applying Serial Block Face Scanning Electron Microscopy (SBF-SEM) in different fields of life science research.
Saskia, Lippens +3 more
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Automated synaptic connectivity inference for volume electron microscopy
Nature Methods, 2017Teravoxel volume electron microscopy data sets from neural tissue can now be acquired in weeks, but data analysis requires years of manual labor. We developed the SyConn framework, which uses deep convolutional neural networks and random forest classifiers to infer a richly annotated synaptic connectivity matrix from manual neurite skeleton ...
Joergen Kornfeld +2 more
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A wide variety of techniques for a volume electron microscopy
MicroscopyAbstract Electron microscopy (EM) is known to be the only research equipment able to resolve the ultrastructure of cells, including intracellular organelles and synapses. Researchers studying the brain connectome have re-evaluated the value of EM. The development of new EM techniques and tools has been active in these two decades.
Yoshiyuki, Kubota +5 more
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Preparation of Retinal Samples for Volume Electron Microscopy
Journal of Visualized ExperimentsVolume electron microscopy (Volume EM) has emerged as a powerful tool for visualizing the 3D structure of cells and tissues with nanometer-level precision. Within the retina, various types of neurons establish synaptic connections in the inner and outer plexiform layers.
Wenna, Zhao +3 more
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A conventional fixation volume electron microscopy protocol for plants
2023Volume electron microscopy techniques play an important role in plant research from understanding organelles and unicellular forms to developmental studies, environmental effects and microbial interactions with large plant structures, to name a few. Due to large air voids central vacuole, cell wall and waxy cuticle, many plant tissues pose challenges ...
Janithri S, Wickramanayake +1 more
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