Results 31 to 40 of about 86,476 (288)
The shape of human gene family phylogenies [PDF]
, 2006 Background: The shape of phylogenetic trees has been used to make inferences about the evolutionary process by comparing the shapes of actual phylogenies with those expected under simple models of the speciation process. Previous studies have focused
James A Cotton +5 more
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The Impact of Whole Genome Duplication on the Evolution of the Arachnids
Integrative And Comparative Biology, 2023 Synopsis The proliferation of genomic resources for Chelicerata in the past 10 years has revealed that the evolution of chelicerate genomes is more dynamic than previously thought, with multiple waves of ancient whole genome duplications affecting separate lineages.
openaire +2 more sources
BMC Bioinformatics, 2022 Background Multiple processes impact the probability of retention of individual genes following whole genome duplication (WGD) events. In analyzing two consecutive whole genome duplication events that occurred in the lineage leading to Atlantic salmon, a
C. Nicholas Henry +6 more
doaj +1 more source
Whole-Genome Duplication and Genome Instability in Cancer Cells: Double the Trouble. [PDF]
Int J Mol Sci, 2023 Whole-genome duplication (WGD) is one of the most common genomic abnormalities in cancers. WGD can provide a source of redundant genes to buffer the deleterious effect of somatic alterations and facilitate clonal evolution in cancer cells. The extra DNA and centrosome burden after WGD is associated with an elevation of genome instability.
Lau TY, Poon RYC.
europepmc +4 more sources
Whole genome duplication and transposable element proliferation drive genome expansion in Corydoradinae catfishes [PDF]
, 2018 Genome size varies significantly across eukaryotic taxa and the largest changes are typically driven by macro-mutations such as whole genome duplications (WGDs) and proliferation of repetitive elements.
Simon Creer +18 more
core +1 more source
BMC Bioinformatics, 2019 Background With the availability of well-assembled genomes of a growing number of organisms, identifying the bioinformatic basis of whole genome duplication (WGD) is a growing field of genomics.
Yongzhi Yang +4 more
doaj +1 more source
Beyond the Whole-Genome Duplication: Phylogenetic Evidence for an Ancient Interspecies Hybridization in the Baker's Yeast Lineage. [PDF]
PLoS Biology, 2015 Whole-genome duplications have shaped the genomes of several vertebrate, plant, and fungal lineages. Earlier studies have focused on establishing when these events occurred and on elucidating their functional and evolutionary consequences, but we still ...
Marina Marcet-Houben, Toni Gabaldón
doaj +1 more source
Inference of Ancient Whole-Genome Duplications and the Evolution of Gene Duplication and Loss Rates [PDF]
Molecular Biology and Evolution, 2019 Abstract Gene tree–species tree reconciliation methods have been employed for studying ancient whole-genome duplication (WGD) events across the eukaryotic tree of life. Most approaches have relied on using maximum likelihood trees and the maximum parsimony reconciliation thereof to count duplication events on specific branches of ...
Zwaenepoel, Arthur, Van de Peer, Yves
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Sturgeon-Paddlefish Whole Genome Duplication Data
, 2023 Contains Code and Raw Data for Redmond et al 2023, Independent rediploidization masks shared whole genome duplication in the sturgeon-paddlefish ...
Manu Kumar Gundappa (15377978) +4 more
core +1 more source
Whole Genome Duplications and Contracted Breakpoint Graphs
SIAM Journal on Computing, 2007 The genome halving problem, motivated by the whole genome duplication events in molecular evolution, was solved by El-Mabrouk and Sankoff in the pioneering paper [SIAM J. Comput., 32 (2003), pp. 754-792]. The El-Mabrouk-Sankoff algorithm is rather complex, inspiring a quest for a simpler solution.
Max A. Alekseyev, Pavel A. Pevzner
openaire +2 more sources